Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28474
1110007A06Rik
RIKEN cDNA 1110007A06 gene
6
68477
Human Homolog
FLJ13910[hypothetical protein FLJ13910]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTTCTTCTG
(
7
)
13.1
0.0131
P8 Cb GC
TCTGTACCAC
1.6
0.0016
Cb medulloblastoma
GCTTCTTCTG
(
7
)
23.1
0.0231
Cb medulloblastoma
TCTTCTCTCA
(
2
)
2.3
0.0023
P8 GC+1d culture
GCTTCTTCTG
(
7
)
11.4
0.0114
P8 GC+1d culture
TCTTCTCTCA
(
2
)
4.6
0.0046
P8 GC+1d culture
AGAAAATGAA
(
7
)
1.1
0.0011
P8 GC+1d culture
TATCTCTTCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTTCTTCTG
(
7
)
10.5
0.0105
P8 GC+SHH+1d culture
GCTTCTCTGT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGTACCAC
1.2
0.0012
3T3 fibroblasts
GCTTCTTCTG
(
7
)
7
0.007
E15 cortex
GCTTCTTCTG
(
7
)
4.9
0.0049
P1 cortex
GCTTCTTCTG
(
7
)
4.5
0.0045
Hypothalamus
GCTTCTTCTG
(
7
)
7.2
0.0072
Hypothalamus
TATCTCTTCA
(
3
)
1.8
0.0018
E12.5 retina
GCTTCTTCTG
(
7
)
5.6
0.0056
E12.5 retina
TATCTCTTCA
(
3
)
1.9
0.0019
E12.5 retina
TCTGTACCAC
1.9
0.0019
E14.5 retina
GCTTCTTCTG
(
7
)
5.5
0.0055
E14.5 retina
AGAAAATGAA
(
7
)
1.8
0.0018
E16.5 retina
GCTTCTTCTG
(
7
)
12.7
0.0127
E18.5 retina
GCTTCTTCTG
(
7
)
10.9
0.0109
E18.5 retina
GCTTCTCTGT
(
2
)
1.8
0.0018
E18.5 retina
TCTTCTCTCA
(
2
)
1.8
0.0018
P0.5 retina
TCTTCTCTCA
(
2
)
5.9
0.0059
P0.5 retina
GCTTCTTCTG
(
7
)
3.9
0.0039
P2.5 retina
GCTTCTTCTG
(
7
)
14.1
0.0141
P2.5 retina
AGAAAATGAA
(
7
)
1.8
0.0018
P2.5 retina
TCTGTACCAC
1.8
0.0018
P2.5 retina
TCTTCTCTCA
(
2
)
1.8
0.0018
P4.5 retina
GCTTCTTCTG
(
7
)
11.9
0.0119
P4.5 retina
AGAAAATGAA
(
7
)
2
0.002
P6.5 retina
GCTTCTTCTG
(
7
)
16.7
0.0167
P6.5 retina
TCTTCTCTCA
(
2
)
3.3
0.0033
P10.5 crx- retina
TCTTCTCTCA
(
2
)
5.6
0.0056
P10.5 crx- retina
GCTTCTTCTG
(
7
)
3.7
0.0037
P10.5 crx+ retina
GCTTCTTCTG
(
7
)
13.5
0.0135
P10.5 crx+ retina
TCTTCTCTCA
(
2
)
1.9
0.0019
Adult retinal
GCTTCTTCTG
(
7
)
1.9
0.0019
Adult retinal
TCTTCTCTCA
(
2
)
1.9
0.0019
ONL
GCTTCTTCTG
(
7
)
7.7
0.0077
ONL
TATCTCTTCA
(
3
)
3.8
0.0038
ONL
TCTTCTCTCA
(
2
)
3.8
0.0038
ONL
GCTTCTCTGT
(
2
)
1.9
0.0019
