Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284853	Gnat1	guanine nucleotide binding protein, alpha transducing 1	9	9 F2 (9 59.0 cM)	14685
Gene Ontology	G-protein coupled receptor protein signaling pathway | G-protein signaling, coupled to cGMP nucleotide second messenger | GTP binding | GTPase activity | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane fraction | phototransduction | signal transducer activity | signal transduction | vision
Human Homolog	GNAT1[guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

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SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTGGTG (10) 22.8 0.0228 P8 Cb GC GGGCTGCTGG (11) 3.3 0.0033 Cb medulloblastoma GTGGCTGGTG (10) 6.9 0.0069 Cb medulloblastoma GGGGCTGGGG (9) 4.6 0.0046 Cb medulloblastoma GTGCTGGTGG (12) 2.3 0.0023 Cb medulloblastoma GTGGCTGGGG (7) 2.3 0.0023 P8 GC+1d culture GTGGCTGGTG (10) 14.8 0.0148 P8 GC+1d culture GTGGCTGGGT (9) 2.3 0.0023 P8 GC+1d culture GGGCTGGTGG (11) 1.1 0.0011 P8 GC+1d culture GGGGCTGGGG (9) 1.1 0.0011 P8 GC+1d culture GTGCCTGGGG (3) 1.1 0.0011 P8 GC+1d culture GTGCTGGTGG (12) 1.1 0.0011 P8 GC+1d culture GTGTCTTTTC 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTGGTG (10) 17.6 0.0176 P8 GC+SHH+1d culture GGGGCTGGGG (9) 3.5 0.0035 P8 GC+SHH+1d culture GGGCTGGTGG (11) 2.3 0.0023 P8 GC+SHH+1d culture AACCAAATAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGCCTGGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTGGGTG (8) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTGGTTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTTGTGG (6) 1.2 0.0012 3T3 fibroblasts GTGGCTGGTG (10) 21 0.021 3T3 fibroblasts GGGCTGGTGG (11) 3.5 0.0035 3T3 fibroblasts GTGCTGGGTG (8) 3.5 0.0035 E15 cortex GTGCCTGGGG (3) 14.8 0.0148 E15 cortex GTGGCTGGTG (10) 14.8 0.0148 E15 cortex GTGGCTGGGT (9) 4.9 0.0049 E15 cortex TGCTGTGGAG (6) 4.9 0.0049 P1 cortex GTGGCTGGTG (10) 9.1 0.0091 P1 cortex GGGGGGGGAA (12) 4.5 0.0045 P1 cortex GTGCTGGTTG (6) 4.5 0.0045 Hypothalamus GTGGCTGGTG (10) 12.7 0.0127 Hypothalamus TGCTGTGGAG (6) 3.6 0.0036 Hypothalamus GGGCTGCTGG (11) 1.8 0.0018 Hypothalamus GGGGCTGGGG (9) 1.8 0.0018 Hypothalamus GTGCTGGTGG (12) 1.8 0.0018 Hypothalamus TTGTCCCTCC (2) 1.8 0.0018 E12.5 retina GTGGCTGGTG (10) 22.5 0.0225 E14.5 retina GTGGCTGGTG (10) 21.9 0.0219 E14.5 retina GGGGCTGGGG (9) 7.3 0.0073 E14.5 retina GTGCCTGGGG (3) 1.8 0.0018 E14.5 retina GTGTCTTTTC 1.8 0.0018 E16.5 retina GTGGCTGGTG (10) 23.5 0.0235 E16.5 retina AACCAAATAA (3) 1.8 0.0018 E16.5 retina GGGCTGCTGG (11) 1.8 0.0018 E16.5 retina GGGGCTGGGG (9) 1.8 0.0018 E16.5 retina GTGCCTGGGG (3) 1.8 0.0018 E18.5 retina GTGGCTGGTG (10) 21.8 0.0218 E18.5 retina GGGGCTGGGG (9) 3.6 0.0036 E18.5 retina GTGCCTGGGG (3) 3.6 0.0036 E18.5 retina AACCAAATAA (3) 1.8 0.0018 E18.5 retina GTGTCTTTTC 1.8 0.0018 P0.5 retina GTGGCTGGTG (10) 17.7 0.0177 P0.5 retina GGGCTGGTGG (11) 2 0.002 P0.5 retina GGGGGGCGGG (11) 2 0.002 P0.5 retina GGGGGGGGAA (12) 2 0.002 P0.5 retina GTGGCTGGGT (9) 2 0.002 P2.5 retina GTGGCTGGTG (10) 21.1 0.0211 P2.5 retina GGGGGGGGAA (12) 1.8 0.0018 P2.5 retina GTGGCTGGGT (9) 1.8 0.0018 P2.5 retina TGCTGTGGAG (6) 1.8 0.0018 P4.5 retina GTGGCTGGTG (10) 21.8 0.0218 P4.5 retina GTGCCTGGGG (3) 2 0.002 P4.5 retina GTGCTTGTGG (6) 2 0.002 P6.5 retina GTGGCTGGTG (10) 15 0.015 P6.5 retina GGGGCTGGGG (9) 3.3 0.0033 P6.5 retina GGGCTGCTGG (11) 1.7 0.0017 P6.5 retina GGGGGGCGGG (11) 1.7 0.0017 P6.5 retina GTGCCTGGGG (3) 1.7 0.0017 P10.5 crx- retina GTGGCTGGTG (10) 5.6 0.0056 P10.5 crx- retina GGGGCTGGGG (9) 3.7 0.0037 P10.5 crx- retina GTGCTGGGTG (8) 3.7 0.0037 P10.5 crx- retina GTGCCTGGGG (3) 1.9 0.0019 P10.5 crx- retina GTGCTGGTGG (12) 1.9 0.0019 P10.5 crx- retina GTGCTTGTGG (6) 1.9 0.0019 P10.5 crx- retina GTGGCTGGGG (7) 1.9 0.0019 P10.5 crx- retina GTGGCTGGGT (9) 1.9 0.0019 P10.5 crx- retina TGCTGTGGAG (6) 1.9 0.0019 P10.5 crx+ retina TTGTCCCTCC (2) 44.2 0.0442 P10.5 crx+ retina GTGGCTGGTG (10) 13.5 0.0135 P10.5 crx+ retina GGGGCTGGGG (9) 5.8 0.0058 P10.5 crx+ retina AGGCTTGCAG (2) 3.8 0.0038 P10.5 crx+ retina GTGCTGGTGG (12) 3.8 0.0038 P10.5 crx+ retina GGGGGGCGGG (11) 1.9 0.0019 P10.5 crx+ retina GTGCTGGTTG (6) 1.9 0.0019 P10.5 crx+ retina GTGGCTGGGG (7) 1.9 0.0019 P10.5 crx+ retina GTGGCTGGGT (9) 1.9 0.0019 Adult retinal TTGTCCCTCC (2) 370.3 0.3703 Adult retinal AGGCTTGCAG (2) 50 0.05 Adult retinal ACGTGCGCTA 14.8 0.0148 Adult retinal GTGCTGGTGG (12) 13 0.013 Adult retinal GTGGCTGGTG (10) 11.1 0.0111 Adult retinal GGGGCTGGGG (9) 9.3 0.0093 Adult retinal GCAGATACTA 3.7 0.0037 Adult retinal GGGGGGGGAA (12) 3.7 0.0037 Adult retinal GTGGCTGGGT (9) 3.7 0.0037 Adult retinal GGGCTGGTGG (11) 1.9 0.0019 ONL TTGTCCCTCC (2) 327.5 0.3275 ONL ACGTGCGCTA 19.2 0.0192 ONL AGGCTTGCAG (2) 17.2 0.0172 ONL GTGGCTGGTG (10) 9.6 0.0096 ONL GTGCTGGTGG (12) 5.7 0.0057 ONL GCAGATACTA 3.8 0.0038 ONL GTGGCTGGGT (9) 1.9 0.0019 ONL GTGTCTTTTC 1.9 0.0019 ONL TGCTGTGGAG (6) 1.9 0.0019