Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284906	Rars	arginyl-tRNA synthetase	11		104458
Gene Ontology	arginine-tRNA ligase activity | arginyl-tRNA aminoacylation | ATP binding | ligase activity | protein biosynthesis | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	RARS[arginyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCACACAAG (4) 22.8 0.0228 P8 Cb GC GTGATGCAAA (2) 8.2 0.0082 P8 Cb GC TTGGCCACCT (3) 3.3 0.0033 P8 Cb GC TGCACACAGG (4) 1.6 0.0016 Cb medulloblastoma GTGATGCAAA (2) 32.4 0.0324 Cb medulloblastoma TGCACACAAG (4) 6.9 0.0069 Cb medulloblastoma TTGGCCACCT (3) 4.6 0.0046 P8 GC+1d culture GTGATGCAAA (2) 17.1 0.0171 P8 GC+1d culture TGCACACAAG (4) 11.4 0.0114 P8 GC+1d culture TTGGGCACCT (3) 4.6 0.0046 P8 GC+1d culture TTGGCCACCT (3) 3.4 0.0034 P8 GC+1d culture GGTCCTTTTG (4) 2.3 0.0023 P8 GC+1d culture CTCAAGTGCA (4) 1.1 0.0011 P8 GC+1d culture TGCACCCAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGCACACAAG (4) 21.1 0.0211 P8 GC+SHH+1d culture GTGATGCAAA (2) 18.7 0.0187 P8 GC+SHH+1d culture GGTCCTTTTG (4) 3.5 0.0035 P8 GC+SHH+1d culture AAAGCCTGGA (6) 1.2 0.0012 P8 GC+SHH+1d culture CTCAAGTGCA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCACTTTCA 1.2 0.0012 P8 GC+SHH+1d culture TTGGCCACCT (3) 1.2 0.0012 3T3 fibroblasts TGCACACAAG (4) 17.5 0.0175 3T3 fibroblasts TGCACACAGG (4) 3.5 0.0035 E15 cortex AAAGCCTGGA (6) 4.9 0.0049 E15 cortex GTGATGCAAA (2) 4.9 0.0049 E15 cortex TGCACACAAG (4) 4.9 0.0049 P1 cortex GTGATGCAAA (2) 13.6 0.0136 P1 cortex TTGGCCACCT (3) 13.6 0.0136 Hypothalamus GTGATGCAAA (2) 27.2 0.0272 Hypothalamus TGCACACAAG (4) 10.9 0.0109 Hypothalamus TTGGCCACCT (3) 5.4 0.0054 Hypothalamus TGCACCCAAG (2) 1.8 0.0018 Hypothalamus TTCACTTTCA 1.8 0.0018 Hypothalamus TTGGGCACCT (3) 1.8 0.0018 E12.5 retina TGCACACAAG (4) 33.8 0.0338 E12.5 retina GTGATGCAAA (2) 5.6 0.0056 E12.5 retina CTCAAGTGCA (4) 1.9 0.0019 E14.5 retina TGCACACAAG (4) 21.9 0.0219 E14.5 retina AAAGCCTGGA (6) 1.8 0.0018 E14.5 retina GTGATGCAAA (2) 1.8 0.0018 E14.5 retina TGCACACAGG (4) 1.8 0.0018 E14.5 retina TTCACTTTCA 1.8 0.0018 E16.5 retina TGCACACAAG (4) 14.5 0.0145 E16.5 retina GTGATGCAAA (2) 5.4 0.0054 E16.5 retina TTGGCCACCT (3) 3.6 0.0036 E16.5 retina AAAGCCTGGA (6) 1.8 0.0018 E16.5 retina TTCACTTTCA 1.8 0.0018 E18.5 retina GTGATGCAAA (2) 23.6 0.0236 E18.5 retina TGCACACAAG (4) 10.9 0.0109 E18.5 retina TTGGCCACCT (3) 5.5 0.0055 E18.5 retina GGTCCTTTTG (4) 1.8 0.0018 P0.5 retina TGCACACAAG (4) 9.8 0.0098 P0.5 retina TTGGCCACCT (3) 5.9 0.0059 P0.5 retina GTGATGCAAA (2) 3.9 0.0039 P2.5 retina GTGATGCAAA (2) 22.9 0.0229 P2.5 retina TGCACACAAG (4) 17.6 0.0176 P2.5 retina GGTCCTTTTG (4) 7 0.007 P2.5 retina TGCACCCAAG (2) 1.8 0.0018 P4.5 retina TGCACACAAG (4) 23.8 0.0238 P4.5 retina GTGATGCAAA (2) 19.8 0.0198 P4.5 retina GGTCCTTTTG (4) 2 0.002 P4.5 retina TTCACTTTCA 2 0.002 P4.5 retina TTGGCCACCT (3) 2 0.002 P6.5 retina GTGATGCAAA (2) 48.4 0.0484 P6.5 retina TGCACACAAG (4) 10 0.01 P6.5 retina CTCAAGTGCA (4) 3.3 0.0033 P6.5 retina TTGGCCACCT (3) 1.7 0.0017 P10.5 crx- retina GTGATGCAAA (2) 13 0.013 P10.5 crx- retina TGCACACAAG (4) 5.6 0.0056 P10.5 crx- retina TTGGCCACCT (3) 3.7 0.0037 P10.5 crx- retina CTCAAGTGCA (4) 1.9 0.0019 P10.5 crx+ retina GTGATGCAAA (2) 23.1 0.0231 P10.5 crx+ retina TGCACACAAG (4) 13.5 0.0135 P10.5 crx+ retina CTCAAGTGCA (4) 3.8 0.0038 Adult retinal GTGATGCAAA (2) 33.3 0.0333 Adult retinal CTCAAGTGCA (4) 3.7 0.0037 Adult retinal TGCACACAAG (4) 1.9 0.0019 ONL GTGATGCAAA (2) 21.1 0.0211 ONL TGCACACAAG (4) 5.7 0.0057 ONL GGTCCTTTTG (4) 1.9 0.0019