Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28536
2810410M20Rik
RIKEN cDNA 2810410M20 gene
17
66310
Mm.28536
A330106M24Rik
RIKEN cDNA A330106M24 gene
17
78592
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATTCCCCTCC
(
4
)
1.6
0.0016
P8 Cb GC
TAAATCTACA
(
2
)
1.6
0.0016
P8 GC+1d culture
ATTCCCCTCC
(
4
)
10.3
0.0103
P8 GC+SHH+1d culture
ATTCCCCTCC
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
TAAATCTACA
(
2
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
ATTCCCCTCC
(
4
)
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
ATTCCCCTCC
(
4
)
9.1
0.0091
Hypothalamus
ATTCCCCTCC
(
4
)
3.6
0.0036
Hypothalamus
TAAATCTACA
(
2
)
1.8
0.0018
E12.5 retina
ATTCCCCTCC
(
4
)
5.6
0.0056
E14.5 retina
ATTCCCCTCC
(
4
)
3.6
0.0036
E14.5 retina
TAAATCTACA
(
2
)
3.6
0.0036
E16.5 retina
ATTCCCCTCC
(
4
)
3.6
0.0036
E16.5 retina
GAGTCGGAGC
(
4
)
3.6
0.0036
E18.5 retina
ATTCCCCTCC
(
4
)
5.5
0.0055
E18.5 retina
GGAATTAAAT
(
2
)
3.6
0.0036
E18.5 retina
GGAAGGAGTG (
8
)
1.8
0.0018
P0.5 retina
ATTCCCCTCC
(
4
)
5.9
0.0059
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P2.5 retina
ATTCCCCTCC
(
4
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TAAATCTACA
(
2
)
1.8
0.0018
P4.5 retina
ATTCCCCTCC
(
4
)
4
0.004
P4.5 retina
GGAAGGAGTG (
8
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
ATTCCCCTCC
(
4
)
6.7
0.0067
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
ATTCCCCTCC
(
4
)
11.1
0.0111
P10.5 crx- retina
GGAAGGAGTG (
8
)
1.9
0.0019
P10.5 crx- retina
GGAATTAAAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
ATTCCCCTCC
(
4
)
5.8
0.0058
Adult retinal
ATTCCCCTCC
(
4
)
5.6
0.0056
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
ATTCCCCTCC
(
4
)
1.9
0.0019
ONL
GAGTCGGAGC
(
4
)
1.9
0.0019
ONL
GGAAGGAGTG (
8
)
1.9
0.0019
ONL
GGAATTAAAT
(
2
)
1.9
0.0019
