Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.285454	Spop	speckle-type POZ protein	11	11 55.6 cM	20747
Gene Ontology	mRNA processing | nucleus | protein binding
Human Homolog	SPOP[speckle-type POZ protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AATATGGAGA 1.6 0.0016 P8 Cb GC CTTCGGATGT 1.6 0.0016 P8 Cb GC GAAAAGACTG (10) 1.6 0.0016 Cb medulloblastoma AATATGGAGA 4.6 0.0046 Cb medulloblastoma AATGTGGAGA (6) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture CTTTTATCCT (4) 3.4 0.0034 P8 GC+1d culture AATATGGAGA 2.3 0.0023 P8 GC+1d culture CTTCGGATGT 2.3 0.0023 P8 GC+1d culture GCTGGCAGCT (8) 2.3 0.0023 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture AATATGGAGA 3.5 0.0035 P8 GC+SHH+1d culture ACCCAGACTT (3) 2.3 0.0023 P8 GC+SHH+1d culture GCTGGCAGCT (8) 2.3 0.0023 P8 GC+SHH+1d culture CTTCGGATGT 1.2 0.0012 3T3 fibroblasts GCTGGCAGCT (8) 14 0.014 3T3 fibroblasts CTTCGGATGT 10.5 0.0105 3T3 fibroblasts CTTTTATCCT (4) 3.5 0.0035 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AATATGGAGA 4.5 0.0045 P1 cortex CTTCGGATGT 4.5 0.0045 P1 cortex GCTGGCAGCT (8) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CTTCGGATGT 3.6 0.0036 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AAGAGCTGGA (7) 1.9 0.0019 E12.5 retina CTTCGGATGT 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TGGACCATCA (4) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AATATGGAGA 3.6 0.0036 E16.5 retina GAAAAGACTG (10) 3.6 0.0036 E16.5 retina CTTCGGATGT 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TGGACCATCA (4) 3.6 0.0036 E18.5 retina AATATGGAGA 1.8 0.0018 E18.5 retina CTTCGGATGT 1.8 0.0018 E18.5 retina GCTGGCAGCT (8) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTTCGGATGT 3.9 0.0039 P0.5 retina AAGAGCTGGA (7) 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AAGAGCTGGA (7) 1.8 0.0018 P2.5 retina CTTCGGATGT 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTTCGGATGT 4 0.004 P4.5 retina AATATGGAGA 2 0.002 P4.5 retina GAAAAGACTG (10) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AATATGGAGA 5 0.005 P6.5 retina CTTCGGATGT 1.7 0.0017 P10.5 crx- retina AATATGGAGA 3.7 0.0037 P10.5 crx- retina ACCCAGACTT (3) 1.9 0.0019 P10.5 crx+ retina CTTCGGATGT 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina AATATGGAGA 1.9 0.0019 P10.5 crx+ retina AATGTGGAGA (6) 1.9 0.0019 P10.5 crx+ retina CTTTTATCCT (4) 1.9 0.0019 P10.5 crx+ retina TGGACCATCA (4) 1.9 0.0019 Adult retinal CTTCGGATGT 11.1 0.0111 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal AATATGGAGA 5.6 0.0056 Adult retinal GAAAAGACTG (10) 1.9 0.0019 Adult retinal GCTGGCAGCT (8) 1.9 0.0019 ONL GCTGGCAGCT (8) 7.7 0.0077 ONL AATATGGAGA 5.7 0.0057 ONL CTTCGGATGT 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AATGTGGAGA (6) 1.9 0.0019