Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2856	Il6ra	interleukin 6 receptor, alpha	3	3 42.1 cM	16194
Gene Ontology	cell surface receptor linked signal transduction | extracellular space | hematopoietin/interferon-class (D200-domain) cytokine receptor activity | integral to membrane | integral to plasma membrane | interleukin receptor activity | membrane | receptor activity
Human Homolog	IL6R[interleukin 6 receptor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTGCCCAC 1.6 0.0016 P8 Cb GC TTTTGTTTTT (9) 1.6 0.0016 Cb medulloblastoma AAAGCAAAAC (6) 2.3 0.0023 Cb medulloblastoma TGCTCTGCCT (20) 2.3 0.0023 Cb medulloblastoma TTTTGTTTTT (9) 2.3 0.0023 P8 GC+1d culture TGCTCTGCCT (20) 10.3 0.0103 P8 GC+SHH+1d culture TGCTCTGCCT (20) 9.4 0.0094 P8 GC+SHH+1d culture TTTTGTTTTT (9) 4.7 0.0047 3T3 fibroblasts AGGACGGTGG (4) 3.5 0.0035 3T3 fibroblasts TGCTCTGCCT (20) 3.5 0.0035 E15 cortex AGGACGGTGG (4) 9.9 0.0099 E15 cortex AAAGCAAAAC (6) 4.9 0.0049 E15 cortex TGCTCTGCCT (20) 4.9 0.0049 P1 cortex TGCTCTGCCT (20) 22.7 0.0227 P1 cortex TTTTGTTTTT (9) 9.1 0.0091 Hypothalamus TGCTCTGCCT (20) 7.2 0.0072 Hypothalamus TTTTGTTTTT (9) 1.8 0.0018 E12.5 retina TGCTCTGCCT (20) 1.9 0.0019 E14.5 retina TTTTGTTTTT (9) 3.6 0.0036 E14.5 retina TCCTGCCCAC 1.8 0.0018 E14.5 retina TGCTCTGCCT (20) 1.8 0.0018 E16.5 retina TGCTCTGCCT (20) 3.6 0.0036 E16.5 retina TTTTGTTTTT (9) 1.8 0.0018 E18.5 retina TGCTCTGCCT (20) 5.5 0.0055 P0.5 retina TGCTCTGCCT (20) 3.9 0.0039 P2.5 retina TGCTCTGCCT (20) 10.6 0.0106 P4.5 retina TGCTCTGCCT (20) 9.9 0.0099 P4.5 retina AAAGCAAAAC (6) 2 0.002 P4.5 retina TTTTGTTTTT (9) 2 0.002 P6.5 retina TGCTCTGCCT (20) 3.3 0.0033 P6.5 retina AGGACGGTGG (4) 1.7 0.0017 P10.5 crx- retina TGCTCTGCCT (20) 3.7 0.0037 P10.5 crx+ retina TGCTCTGCCT (20) 23.1 0.0231 P10.5 crx+ retina TCCTGCCCAC 1.9 0.0019 P10.5 crx+ retina TTTTGTTTTT (9) 1.9 0.0019 Adult retinal TGCTCTGCCT (20) 16.7 0.0167