Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28560
Lyar
Ly1 antibody reactive clone
5
5 24.0 cM
17089
Gene Ontology
DNA binding
|
nucleus
Human Homolog
LYAR[hypothetical protein FLJ20425]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAATAAA
(
17
)
11.4
0.0114
Cb medulloblastoma
AAAAAATAAA
(
17
)
6.9
0.0069
Cb medulloblastoma
ATAAAAAAGA (
6
)
4.6
0.0046
Cb medulloblastoma
CTTTTTTTCA (
9
)
2.3
0.0023
P8 GC+1d culture
AAAAAATAAA
(
17
)
8
0.008
P8 GC+1d culture
ATAAAAAAGA (
6
)
2.3
0.0023
P8 GC+1d culture
AGGCTGCTGG (
5
)
1.1
0.0011
P8 GC+1d culture
CTTTTTTTCA (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAATAAA
(
17
)
2.3
0.0023
P8 GC+SHH+1d culture
ATAAAAAAGA (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAATAAAT (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTTTTTTCA (
9
)
1.2
0.0012
3T3 fibroblasts
AGGCTGCTGG (
5
)
7
0.007
E15 cortex
AGGCTGCTGG (
5
)
4.9
0.0049
Hypothalamus
AAAAAATAAA
(
17
)
9.1
0.0091
Hypothalamus
ATAAAAAAGA (
6
)
1.8
0.0018
E12.5 retina
AAAAAATAAA
(
17
)
9.4
0.0094
E12.5 retina
ATAAAAAAGA (
6
)
1.9
0.0019
E14.5 retina
AAAAAATAAA
(
17
)
5.5
0.0055
E14.5 retina
CTTTTTTTCA (
9
)
1.8
0.0018
E16.5 retina
AAAAAATAAA
(
17
)
9.1
0.0091
E16.5 retina
AGGCTGCTGG (
5
)
1.8
0.0018
E18.5 retina
AAAAAATAAA
(
17
)
16.4
0.0164
E18.5 retina
AAAAATAAAT (
10
)
1.8
0.0018
P0.5 retina
AAAAAATAAA
(
17
)
2
0.002
P2.5 retina
AAAAAATAAA
(
17
)
12.3
0.0123
P2.5 retina
CTTTTTTTCA (
9
)
3.5
0.0035
P2.5 retina
ATAAAAAAGA (
6
)
1.8
0.0018
P4.5 retina
AAAAAATAAA
(
17
)
11.9
0.0119
P4.5 retina
ATAAAAAAGA (
6
)
2
0.002
P6.5 retina
AAAAAATAAA
(
17
)
10
0.01
P6.5 retina
AAAAATAAAT (
10
)
3.3
0.0033
P6.5 retina
ATAAAAAAGA (
6
)
3.3
0.0033
P6.5 retina
AGGCTGCTGG (
5
)
1.7
0.0017
P10.5 crx- retina
AAAAAATAAA
(
17
)
5.6
0.0056
P10.5 crx- retina
CTTTTTTTCA (
9
)
3.7
0.0037
P10.5 crx- retina
AAAAATAAAT (
10
)
1.9
0.0019
P10.5 crx- retina
ATAAAAAAGA (
6
)
1.9
0.0019
P10.5 crx- retina
GTACTGAGCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAATAAA
(
17
)
1.9
0.0019
ONL
AAAAAATAAA
(
17
)
23
0.023
ONL
ATAAAAAAGA (
6
)
5.7
0.0057
ONL
AAAAATAAAT (
10
)
3.8
0.0038
ONL
GTACTGAGCT
(
2
)
3.8
0.0038
