Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.286066	Rpgrip1	retinitis pigmentosa GTPase regulator interacting protein 1	14	14 C1	77945
Mm.286066	Supt16h	suppressor of Ty 16 homolog (S. cerevisiae)	14	14 (14 20.0 cM)	114741
Gene Ontology	hydrolase activity | translation elongation factor activity
Human Homolog	SUPT16H[suppressor of Ty 16 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCATTCTTC (3) 1.6 0.0016 P8 Cb GC GCCAGCAAAA (8) 1.6 0.0016 Cb medulloblastoma AAGATGATTT (7) 4.6 0.0046 Cb medulloblastoma ACCATTCTTC (3) 4.6 0.0046 Cb medulloblastoma TGGAGGCCTG (9) 4.6 0.0046 Cb medulloblastoma GCCAGCAAAA (8) 2.3 0.0023 P8 GC+1d culture AAGATGATTT (7) 3.4 0.0034 P8 GC+1d culture GATCTCAAAG (3) 2.3 0.0023 P8 GC+1d culture ACCATTCTTC (3) 1.1 0.0011 P8 GC+1d culture TGGAGGCCTG (9) 1.1 0.0011 P8 GC+1d culture TTGACTCCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture GATCTCAAAG (3) 4.7 0.0047 P8 GC+SHH+1d culture AAGATGATTT (7) 2.3 0.0023 P8 GC+SHH+1d culture TGGAGGCCTG (9) 2.3 0.0023 P8 GC+SHH+1d culture ACCATTCTTC (3) 1.2 0.0012 3T3 fibroblasts GCCAGCAAAA (8) 7 0.007 3T3 fibroblasts TGGAGGCCTG (9) 3.5 0.0035 E15 cortex GATCTCAAAG (3) 4.9 0.0049 E15 cortex GCCAGCAAAA (8) 4.9 0.0049 P1 cortex TGGAGGCCTG (9) 9.1 0.0091 P1 cortex ACCATTCTTC (3) 4.5 0.0045 P1 cortex TTGACTCCTT (3) 4.5 0.0045 Hypothalamus AAGATGATTT (7) 1.8 0.0018 Hypothalamus GATGTGGTTA (2) 1.8 0.0018 Hypothalamus GCTGCATAGC (3) 1.8 0.0018 Hypothalamus TGGAGGCCTG (9) 1.8 0.0018 E12.5 retina ACCATTCTTC (3) 3.8 0.0038 E12.5 retina AAGAGCTGGA (7) 1.9 0.0019 E12.5 retina AAGATGATTT (7) 1.9 0.0019 E12.5 retina GCTGCATAGC (3) 1.9 0.0019 E12.5 retina TGGAGGCCTG (9) 1.9 0.0019 E14.5 retina AAGATGATTT (7) 7.3 0.0073 E14.5 retina ACCATTCTTC (3) 1.8 0.0018 E14.5 retina GCTTACCTTG (6) 1.8 0.0018 E16.5 retina GCTGCATAGC (3) 5.4 0.0054 E16.5 retina AAGATGATTT (7) 3.6 0.0036 E16.5 retina CCATAAACCT (3) 1.8 0.0018 E16.5 retina TGGAGGCCTG (9) 1.8 0.0018 E18.5 retina GCTGCATAGC (3) 5.5 0.0055 E18.5 retina TGGAGGCCTG (9) 1.8 0.0018 P0.5 retina GCTGCATAGC (3) 5.9 0.0059 P0.5 retina TGGAGGCCTG (9) 3.9 0.0039 P0.5 retina AAGAGCTGGA (7) 2 0.002 P0.5 retina AAGATGATTT (7) 2 0.002 P0.5 retina CCATAAACCT (3) 2 0.002 P2.5 retina GCTGCATAGC (3) 22.9 0.0229 P2.5 retina GATCTCAAAG (3) 5.3 0.0053 P2.5 retina TGGAGGCCTG (9) 5.3 0.0053 P2.5 retina AAGATGATTT (7) 3.5 0.0035 P2.5 retina ACCATTCTTC (3) 3.5 0.0035 P2.5 retina CCATAAACCT (3) 3.5 0.0035 P2.5 retina AAGAGCTGGA (7) 1.8 0.0018 P2.5 retina GCTTACCTTG (6) 1.8 0.0018 P2.5 retina TTGACTCCTT (3) 1.8 0.0018 P4.5 retina GCTGCATAGC (3) 43.6 0.0436 P4.5 retina ACCATTCTTC (3) 15.9 0.0159 P4.5 retina CCATAAACCT (3) 7.9 0.0079 P4.5 retina GATCTCAAAG (3) 5.9 0.0059 P4.5 retina AAGATGATTT (7) 2 0.002 P4.5 retina TTGACTCCTT (3) 2 0.002 P6.5 retina GCTGCATAGC (3) 45 0.045 P6.5 retina ACCATTCTTC (3) 6.7 0.0067 P6.5 retina AAGATGATTT (7) 3.3 0.0033 P6.5 retina CCATAAACCT (3) 3.3 0.0033 P6.5 retina GCTTACCTTG (6) 3.3 0.0033 P6.5 retina TGGAGGCCTG (9) 3.3 0.0033 P6.5 retina GATGTGGTTA (2) 1.7 0.0017 P6.5 retina GCCAGCAAAA (8) 1.7 0.0017 P10.5 crx- retina GCTGCATAGC (3) 13 0.013 P10.5 crx- retina GATCTCAAAG (3) 3.7 0.0037 P10.5 crx- retina AAGATGATTT (7) 1.9 0.0019 P10.5 crx- retina ACCATTCTTC (3) 1.9 0.0019 P10.5 crx- retina GCTTACCTTG (6) 1.9 0.0019 P10.5 crx+ retina GCTGCATAGC (3) 80.7 0.0807 P10.5 crx+ retina CCATAAACCT (3) 13.5 0.0135 P10.5 crx+ retina ACCATTCTTC (3) 3.8 0.0038 Adult retinal GCTGCATAGC (3) 18.5 0.0185 Adult retinal CCATAAACCT (3) 7.4 0.0074 Adult retinal AAGATGATTT (7) 1.9 0.0019 Adult retinal ACCATTCTTC (3) 1.9 0.0019 Adult retinal GATCTCAAAG (3) 1.9 0.0019 Adult retinal TGGAGGCCTG (9) 1.9 0.0019 ONL GCTGCATAGC (3) 23 0.023 ONL AAGATGATTT (7) 5.7 0.0057 ONL ACCATTCTTC (3) 3.8 0.0038 ONL CCATAAACCT (3) 1.9 0.0019 ONL GATGTGGTTA (2) 1.9 0.0019