Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28646
6430596G11Rik
RIKEN cDNA 6430596G11 gene
7
232906
Human Homolog
GRLF1[glucocorticoid receptor DNA binding factor 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCCCTGTGT
(
3
)
6.5
0.0065
P8 Cb GC
GATGCTGTGG
(
7
)
1.6
0.0016
P8 Cb GC
GCACAAGAAC (
5
)
1.6
0.0016
P8 Cb GC
GGTCCCACTG (
3
)
1.6
0.0016
Cb medulloblastoma
AAGAGTTTTT (
3
)
4.6
0.0046
Cb medulloblastoma
TTCCCTGTGT
(
3
)
4.6
0.0046
Cb medulloblastoma
GATGCTGTGG
(
7
)
2.3
0.0023
Cb medulloblastoma
GGCAGCCATC
(
3
)
2.3
0.0023
Cb medulloblastoma
GGTCCCACTG (
3
)
2.3
0.0023
P8 GC+1d culture
TTCCCTGTGT
(
3
)
12.6
0.0126
P8 GC+1d culture
GGTCCCACTG (
3
)
2.3
0.0023
P8 GC+1d culture
GCACAAGAAC (
5
)
1.1
0.0011
P8 GC+1d culture
GGCAGCCATC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTCCCTGTGT
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GGCAGCCATC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GGTCCCACTG (
3
)
1.2
0.0012
3T3 fibroblasts
GCCCCTGCCA (
5
)
7
0.007
3T3 fibroblasts
GATGCTGTGG
(
7
)
3.5
0.0035
3T3 fibroblasts
GGCAGCCATC
(
3
)
3.5
0.0035
3T3 fibroblasts
TTCCCTGTGT
(
3
)
3.5
0.0035
E15 cortex
GGTCCCACTG (
3
)
9.9
0.0099
E15 cortex
GATGCTGTGG
(
7
)
4.9
0.0049
E15 cortex
GGCAGCCATC
(
3
)
4.9
0.0049
P1 cortex
TTCCCTGTGT
(
3
)
4.5
0.0045
Hypothalamus
GGTCCCACTG (
3
)
5.4
0.0054
Hypothalamus
TTCCCTGTGT
(
3
)
3.6
0.0036
Hypothalamus
GATGCTGTGG
(
7
)
1.8
0.0018
Hypothalamus
GGCAGCCATC
(
3
)
1.8
0.0018
E12.5 retina
GATGCTGTGG
(
7
)
9.4
0.0094
E12.5 retina
TTCCCTGTGT
(
3
)
5.6
0.0056
E12.5 retina
GGTCCCACTG (
3
)
1.9
0.0019
E14.5 retina
TTCCCTGTGT
(
3
)
10.9
0.0109
E14.5 retina
GATGCTGTGG
(
7
)
1.8
0.0018
E14.5 retina
GGCAGCCATC
(
3
)
1.8
0.0018
E14.5 retina
GGTCCCACTG (
3
)
1.8
0.0018
E16.5 retina
TTCCCTGTGT
(
3
)
7.2
0.0072
E16.5 retina
GCACAAGAAC (
5
)
1.8
0.0018
E16.5 retina
GGTCCCACTG (
3
)
1.8
0.0018
E18.5 retina
GGCAGCCATC
(
3
)
1.8
0.0018
E18.5 retina
TTCCCTGTGT
(
3
)
1.8
0.0018
P0.5 retina
GATGCTGTGG
(
7
)
3.9
0.0039
P0.5 retina
TTCCCTGTGT
(
3
)
2
0.002
P2.5 retina
TTCCCTGTGT
(
3
)
8.8
0.0088
P2.5 retina
GCACAAGAAC (
5
)
1.8
0.0018
P2.5 retina
GCCCCTGCCA (
5
)
1.8
0.0018
P4.5 retina
GGTCCCACTG (
3
)
4
0.004
P4.5 retina
AAGAGTTTTT (
3
)
2
0.002
P4.5 retina
GGCAGCCATC
(
3
)
2
0.002
P4.5 retina
TTCCCTGTGT
(
3
)
2
0.002
P6.5 retina
TTCCCTGTGT
(
3
)
3.3
0.0033
P6.5 retina
AAGAGTTTTT (
3
)
1.7
0.0017
P6.5 retina
GGTCCCACTG (
3
)
1.7
0.0017
P10.5 crx- retina
TTCCCTGTGT
(
3
)
3.7
0.0037
P10.5 crx+ retina
TTCCCTGTGT
(
3
)
7.7
0.0077
P10.5 crx+ retina
GGTCCCACTG (
3
)
3.8
0.0038
P10.5 crx+ retina
GATGCTGTGG
(
7
)
1.9
0.0019
P10.5 crx+ retina
GCACAAGAAC (
5
)
1.9
0.0019
P10.5 crx+ retina
GGCAGCCATC
(
3
)
1.9
0.0019
Adult retinal
TTCCCTGTGT
(
3
)
1.9
0.0019
ONL
TTCCCTGTGT
(
3
)
3.8
0.0038
ONL
GGTCCCACTG (
3
)
1.9
0.0019
