Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28650	Rab6	RAB6, member RAS oncogene family	7		19346
Gene Ontology	Golgi apparatus | GTP binding | intracellular | intracellular protein transport | protein binding | protein transport | small GTPase mediated signal transduction
Human Homolog	RAB6A[RAB6A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCCTGAAATA (2) 22.8 0.0228 P8 Cb GC GTGAAATTAT (2) 13.1 0.0131 P8 Cb GC GGATGGAGTT 8.2 0.0082 P8 Cb GC GTGATGAAGC (2) 6.5 0.0065 P8 Cb GC AGAGCAACAG 1.6 0.0016 P8 Cb GC TGAAGGGACA (2) 1.6 0.0016 Cb medulloblastoma TCCTGAAATA (2) 48.6 0.0486 Cb medulloblastoma GTGAAATTAT (2) 16.2 0.0162 Cb medulloblastoma GGATGGAGTT 13.9 0.0139 Cb medulloblastoma GTGATGAAGC (2) 4.6 0.0046 Cb medulloblastoma AGAGCAACAG 2.3 0.0023 Cb medulloblastoma GCAATATGTA 2.3 0.0023 Cb medulloblastoma TCTTGAAATA 2.3 0.0023 P8 GC+1d culture TCCTGAAATA (2) 17.1 0.0171 P8 GC+1d culture GTGATGAAGC (2) 9.1 0.0091 P8 GC+1d culture GGATGGAGTT 6.8 0.0068 P8 GC+1d culture GTGAAATTAT (2) 6.8 0.0068 P8 GC+1d culture GCAATATGTA 2.3 0.0023 P8 GC+1d culture AGAGGCTCGG (2) 1.1 0.0011 P8 GC+1d culture GGTTCAAATT (2) 1.1 0.0011 P8 GC+1d culture GTGAAACTTA (2) 1.1 0.0011 P8 GC+1d culture TCTTGTTTGT (10) 1.1 0.0011 P8 GC+SHH+1d culture TCCTGAAATA (2) 19.9 0.0199 P8 GC+SHH+1d culture GTGAAATTAT (2) 9.4 0.0094 P8 GC+SHH+1d culture GGATGGAGTT 8.2 0.0082 P8 GC+SHH+1d culture GTGATGAAGC (2) 5.9 0.0059 P8 GC+SHH+1d culture TCTTGTTTGT (10) 2.3 0.0023 P8 GC+SHH+1d culture TTTGAGTATA 2.3 0.0023 3T3 fibroblasts AGAGGCTCGG (2) 3.5 0.0035 3T3 fibroblasts CACACAGTGC (8) 3.5 0.0035 3T3 fibroblasts GGATGGAGTT 3.5 0.0035 3T3 fibroblasts GTGATGAAGC (2) 3.5 0.0035 E15 cortex GGATGGAGTT 9.9 0.0099 E15 cortex GTGAAATTAT (2) 4.9 0.0049 E15 cortex TCCTGAAATA (2) 4.9 0.0049 P1 cortex TCCTGAAATA (2) 36.4 0.0364 P1 cortex GTGATGAAGC (2) 18.2 0.0182 P1 cortex AGAGGCTCGG (2) 4.5 0.0045 P1 cortex GCAATATGTA 4.5 0.0045 P1 cortex GGATGGAGTT 4.5 0.0045 P1 cortex GTGAAATTAT (2) 4.5 0.0045 Hypothalamus TCCTGAAATA (2) 41.7 0.0417 Hypothalamus GGATGGAGTT 9.1 0.0091 Hypothalamus GTGAAATTAT (2) 9.1 0.0091 Hypothalamus AGGAGGTGAG (3) 3.6 0.0036 Hypothalamus GGTTCAAATT (2) 3.6 0.0036 Hypothalamus GTGATGAAGC (2) 3.6 0.0036 Hypothalamus TGAAGGGACA (2) 1.8 0.0018 E12.5 retina TCCTGAAATA (2) 7.5 0.0075 E12.5 retina GTGAAATTAT (2) 3.8 0.0038 E12.5 retina GTGATGAAGC (2) 3.8 0.0038 E12.5 retina AGAGGCTCGG (2) 1.9 0.0019 E12.5 retina GGATGGAGTT 1.9 0.0019 E12.5 retina GGTTCAAATT (2) 1.9 0.0019 E12.5 retina TGAAGGGACA (2) 1.9 0.0019 E14.5 retina TCCTGAAATA (2) 29.2 0.0292 E14.5 retina GTGAAATTAT (2) 5.5 0.0055 E14.5 retina AGGAGGTGAG (3) 3.6 0.0036 E14.5 retina GGATGGAGTT 3.6 0.0036 E14.5 retina AGAGCAACAG 1.8 0.0018 E14.5 retina GGTTCAAATT (2) 1.8 0.0018 E14.5 retina GTGATGAAGC (2) 1.8 0.0018 E14.5 retina TCTTGAAATA 1.8 0.0018 E16.5 retina TCCTGAAATA (2) 27.2 0.0272 E16.5 retina GGATGGAGTT 7.2 0.0072 E16.5 retina GTGAAATTAT (2) 5.4 0.0054 E16.5 retina AGGAGGTGAG (3) 3.6 0.0036 E16.5 retina GCAATATGTA 3.6 0.0036 E16.5 retina TTTGAGTATA 3.6 0.0036 E16.5 retina GTGAAACTTA (2) 1.8 0.0018 E16.5 retina GTGATGAAGC (2) 1.8 0.0018 E16.5 retina TGAAGGGACA (2) 1.8 0.0018 E18.5 retina TCCTGAAATA (2) 40 0.04 E18.5 retina GGATGGAGTT 9.1 0.0091 E18.5 retina GTGATGAAGC (2) 3.6 0.0036 E18.5 retina CACACAGTGC (8) 1.8 0.0018 E18.5 retina GCAATATGTA 1.8 0.0018 E18.5 retina GTGAAATTAT (2) 1.8 0.0018 E18.5 retina TCTTGTTTGT (10) 1.8 0.0018 P0.5 retina GGATGGAGTT 13.7 0.0137 P0.5 retina TCCTGAAATA (2) 11.8 0.0118 P0.5 retina AGAGGCTCGG (2) 7.9 0.0079 P0.5 retina GTGAAATTAT (2) 5.9 0.0059 P0.5 retina GCAATATGTA 2 0.002 P2.5 retina TCCTGAAATA (2) 26.4 0.0264 P2.5 retina GGATGGAGTT 8.8 0.0088 P2.5 retina GTGATGAAGC (2) 7 0.007 P2.5 retina GTGAAATTAT (2) 3.5 0.0035 P2.5 retina GGTTCAAATT (2) 1.8 0.0018 P4.5 retina TCCTGAAATA (2) 25.8 0.0258 P4.5 retina GTGAAATTAT (2) 7.9 0.0079 P4.5 retina GTGATGAAGC (2) 7.9 0.0079 P4.5 retina AGAGCAACAG 2 0.002 P4.5 retina GGATGGAGTT 2 0.002 P4.5 retina GTGAAACTTA (2) 2 0.002 P4.5 retina TGAAGGGACA (2) 2 0.002 P4.5 retina TTTGAGTATA 2 0.002 P6.5 retina TCCTGAAATA (2) 23.3 0.0233 P6.5 retina GTGATGAAGC (2) 10 0.01 P6.5 retina AGAGGCTCGG (2) 3.3 0.0033 P6.5 retina GCAATATGTA 1.7 0.0017 P6.5 retina GGATGGAGTT 1.7 0.0017 P6.5 retina GGCAAATATG (2) 1.7 0.0017 P6.5 retina GTGAAATTAT (2) 1.7 0.0017 P6.5 retina TTTGAGTATA 1.7 0.0017 P10.5 crx- retina TCCTGAAATA (2) 22.3 0.0223 P10.5 crx- retina GGATGGAGTT 7.4 0.0074 P10.5 crx- retina AGGAGGTGAG (3) 1.9 0.0019 P10.5 crx- retina GTGAAATTAT (2) 1.9 0.0019 P10.5 crx+ retina TCCTGAAATA (2) 28.8 0.0288 P10.5 crx+ retina GTGATGAAGC (2) 19.2 0.0192 P10.5 crx+ retina GTGAAATTAT (2) 7.7 0.0077 P10.5 crx+ retina GGATGGAGTT 5.8 0.0058 P10.5 crx+ retina CACACAGTGC (8) 1.9 0.0019 P10.5 crx+ retina GCAATATGTA 1.9 0.0019 P10.5 crx+ retina GTGAAACTTA (2) 1.9 0.0019 Adult retinal TCCTGAAATA (2) 7.4 0.0074 Adult retinal GTGATGAAGC (2) 5.6 0.0056 Adult retinal GGATGGAGTT 3.7 0.0037 Adult retinal GGCAAATATG (2) 3.7 0.0037 Adult retinal GTGAAATTAT (2) 3.7 0.0037 Adult retinal AGAGGCTCGG (2) 1.9 0.0019 Adult retinal GGTTCAAATT (2) 1.9 0.0019 ONL GGATGGAGTT 3.8 0.0038 ONL GTGAAATTAT (2) 1.9 0.0019 ONL TCCTGAAATA (2) 1.9 0.0019 ONL TCTTGAAATA 1.9 0.0019 ONL TTTGAGTATA 1.9 0.0019