Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.286622	Pex13	peroxisomal biogenesis factor 13	11		72129
Gene Ontology	integral to membrane | integral to peroxisomal membrane | intracellular protein transport | membrane fraction | peroxisome | peroxisome targeting signal receptor activity | protein transport | protein transporter activity | protein-peroxisome targeting | transport
Human Homolog	PEX13[peroxisome biogenesis factor 13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CGCCACCACC (12) 6.5 0.0065 P8 Cb GC TTTGTGGGCA (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CGCCACCACC (12) 6.9 0.0069 Cb medulloblastoma TGGGTGTTGG (8) 2.3 0.0023 Cb medulloblastoma TTTGTGGGCA (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CGCCACCACC (12) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CGCCACCACC (12) 5.9 0.0059 P8 GC+SHH+1d culture TTTGTGGGCA (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGGTGTTGG (8) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CGCCACCACC (12) 7 0.007 3T3 fibroblasts TGGGTGTTGG (8) 3.5 0.0035 3T3 fibroblasts TTTGTGGGCA (4) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CGCCACCACC (12) 14.8 0.0148 E15 cortex TTTGTGGGCA (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CGCCACCACC (12) 4.5 0.0045 P1 cortex TTTGTGGGCA (4) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CGCCACCACC (12) 3.6 0.0036 Hypothalamus TTTGTGGGCA (4) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CGCCACCACC (12) 1.9 0.0019 E12.5 retina TCTAAATGTT 1.9 0.0019 E12.5 retina TGGGTGTTGG (8) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CGCCACCACC (12) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CGCCACCACC (12) 3.6 0.0036 E16.5 retina TGGGTGTTGG (8) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CGCCACCACC (12) 10.9 0.0109 E18.5 retina TGGGTGTTGG (8) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TTTGTGGGCA (4) 7.9 0.0079 P0.5 retina CGCCACCACC (12) 5.9 0.0059 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CGCCACCACC (12) 10.6 0.0106 P2.5 retina TGGGTGTTGG (8) 1.8 0.0018 P2.5 retina TTTGTGGGCA (4) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CGCCACCACC (12) 7.9 0.0079 P4.5 retina TTTGTGGGCA (4) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CGCCACCACC (12) 8.3 0.0083 P6.5 retina TCTAAATGTT 3.3 0.0033 P6.5 retina TTTGTGGGCA (4) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TTTGTGGGCA (4) 3.7 0.0037 P10.5 crx- retina CGCCACCACC (12) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TTTGTGGGCA (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CGCCACCACC (12) 9.3 0.0093 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CGCCACCACC (12) 1.9 0.0019