Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28765	Tram1	translocating chain-associating membrane protein 1	1		72265
Gene Ontology	endoplasmic reticulum | integral to membrane | protein targeting
Human Homolog	TRAM1[translocation associated membrane protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC ATGTGGAAGT 1.6 0.0016 P8 Cb GC CATTTCCTGA 1.6 0.0016 P8 Cb GC CTTTCTCTTC 1.6 0.0016 Cb medulloblastoma CTTTCTCTTC 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture ATGTGGAAGT 3.4 0.0034 P8 GC+1d culture TCTGCATCTC (7) 2.3 0.0023 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture CTTTCTCTTC 1.2 0.0012 E15 cortex CATTTCCTGA 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex CATTTCCTGA 4.5 0.0045 P1 cortex CTTTCTCTTC 4.5 0.0045 P1 cortex CTTTTTTTTC (8) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina AAGGCTTGTG (2) 1.9 0.0019 E12.5 retina ATGTGGAAGT 1.9 0.0019 E12.5 retina CATTTCCTGA 1.9 0.0019 E12.5 retina CTTTTTTTTC (8) 1.9 0.0019 E12.5 retina TCTGCATCTC (7) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TCTGCATCTC (7) 3.6 0.0036 E14.5 retina AAGGCTTGTG (2) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina CTTTTTTTTC (8) 1.8 0.0018 E16.5 retina TCTGCATCTC (7) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina CTTTCTCTTC 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CTTTCTCTTC 3.5 0.0035 P2.5 retina CATTTCCTGA 1.8 0.0018 P2.5 retina TCTGCATCTC (7) 1.8 0.0018 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina CTTTCTCTTC 2 0.002 P4.5 retina TCTGCATCTC (7) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TCTGCATCTC (7) 1.7 0.0017 P10.5 crx- retina CTTTCTCTTC 5.6 0.0056 P10.5 crx- retina AAGGCTTGTG (2) 1.9 0.0019 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina CTTTCTCTTC 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 ONL CTTTCTCTTC 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038