Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287660	5830406C15Rik	RIKEN cDNA 5830406C15 gene	17		67597
Mm.287660	4930453J04Rik	RIKEN cDNA 4930453J04 gene	17		74652
Mm.287660	AW047481	expressed sequence AW047481	17		106762
Mm.287660	9630025F12Rik	RIKEN cDNA 9630025F12 gene	17		319252
Mm.287660	Prkce	protein kinase C, epsilon	17		18754
Gene Ontology	ATP binding | calcium independent protein kinase C activity | chemosensory behavior | cytoplasm | diacylglycerol binding | intracellular signaling cascade | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | regulation of peptidyl-tyrosine phosphorylation | transferase activity
Human Homolog	PRKCE[protein kinase C, epsilon]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 68 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGAAATCA (8) 6.5 0.0065 P8 Cb GC AGGAGGAGGA (16) 1.6 0.0016 P8 Cb GC GGTCCCAGCA (11) 1.6 0.0016 Cb medulloblastoma CTCAAAAAAA (13) 6.9 0.0069 Cb medulloblastoma GAAGAAATCA (8) 6.9 0.0069 Cb medulloblastoma AAGGATAGTA (5) 2.3 0.0023 Cb medulloblastoma GGACTGGGGC (10) 2.3 0.0023 Cb medulloblastoma GGTCCCAGCA (11) 2.3 0.0023 P8 GC+1d culture CTCAAAAAAA (13) 5.7 0.0057 P8 GC+1d culture GGTCCCAGCA (11) 3.4 0.0034 P8 GC+1d culture AAGGATAGTA (5) 2.3 0.0023 P8 GC+1d culture GGACTGGGGC (10) 2.3 0.0023 P8 GC+1d culture ACACTACACA (6) 1.1 0.0011 P8 GC+SHH+1d culture GGTCCCAGCA (11) 7 0.007 P8 GC+SHH+1d culture AAGGATAGTA (5) 1.2 0.0012 P8 GC+SHH+1d culture AGGAGGAGGA (16) 1.2 0.0012 P8 GC+SHH+1d culture CTCAAAAAAA (13) 1.2 0.0012 P8 GC+SHH+1d culture GGACTGGGGC (10) 1.2 0.0012 3T3 fibroblasts GGTCCCAGCA (11) 7 0.007 3T3 fibroblasts CTCAAAAAAA (13) 3.5 0.0035 E15 cortex GGTCCCAGCA (11) 4.9 0.0049 Hypothalamus GAAGAAATCA (8) 1.8 0.0018 Hypothalamus GGTCCCAGCA (11) 1.8 0.0018 E12.5 retina GGTCCCAGCA (11) 3.8 0.0038 E12.5 retina AAGGATAGTA (5) 1.9 0.0019 E12.5 retina CTCAAAAAAA (13) 1.9 0.0019 E12.5 retina GAAGAAATCA (8) 1.9 0.0019 E14.5 retina AAGGATAGTA (5) 1.8 0.0018 E14.5 retina CTCAAAAAAA (13) 1.8 0.0018 E14.5 retina GGTCCCAGCA (11) 1.8 0.0018 E16.5 retina GGACTGGGGC (10) 1.8 0.0018 E18.5 retina GGACTGGGGC (10) 3.6 0.0036 E18.5 retina GGTCCCAGCA (11) 3.6 0.0036 E18.5 retina ACACTACACA (6) 1.8 0.0018 E18.5 retina CTCAAAAAAA (13) 1.8 0.0018 E18.5 retina GAAGAAATCA (8) 1.8 0.0018 P0.5 retina AGGAGGAGGA (16) 2 0.002 P0.5 retina GGACTGGGGC (10) 2 0.002 P0.5 retina GGTCCCAGCA (11) 2 0.002 P2.5 retina GGTCCCAGCA (11) 5.3 0.0053 P2.5 retina CTCAAAAAAA (13) 1.8 0.0018 P2.5 retina GAACAAATCA (8) 1.8 0.0018 P2.5 retina GAAGAAATCA (8) 1.8 0.0018 P4.5 retina GGTCCCAGCA (11) 7.9 0.0079 P4.5 retina CTCAAAAAAA (13) 5.9 0.0059 P4.5 retina GAACAAATCA (8) 2 0.002 P4.5 retina GGACTGGGGC (10) 2 0.002 P4.5 retina GTGGTATCAT (6) 2 0.002 P6.5 retina GGTCCCAGCA (11) 10 0.01 P6.5 retina AAGGATAGTA (5) 1.7 0.0017 P6.5 retina GTGGTATCAT (6) 1.7 0.0017 P10.5 crx- retina GAAGAAATCA (8) 5.6 0.0056 P10.5 crx- retina AAGGATAGTA (5) 3.7 0.0037 P10.5 crx- retina GGACTGGGGC (10) 3.7 0.0037 P10.5 crx- retina GAACAAATCA (8) 1.9 0.0019 P10.5 crx+ retina AGGAGGAGGA (16) 3.8 0.0038 P10.5 crx+ retina ACACTACACA (6) 1.9 0.0019 P10.5 crx+ retina GAAGAAATCA (8) 1.9 0.0019 P10.5 crx+ retina GGTCCCAGCA (11) 1.9 0.0019 Adult retinal AAGGATAGTA (5) 1.9 0.0019 Adult retinal CTCAAAAAAA (13) 1.9 0.0019 Adult retinal GAACAAATCA (8) 1.9 0.0019 Adult retinal GAAGAAATCA (8) 1.9 0.0019 ONL ACACTACACA (6) 1.9 0.0019 ONL CTCAAAAAAA (13) 1.9 0.0019 ONL GAAGAAATCA (8) 1.9 0.0019 ONL GGTCCCAGCA (11) 1.9 0.0019 ONL GTGGTATCAT (6) 1.9 0.0019