Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28808	Pfdn4	prefoldin 4	2		109054
Gene Ontology	chaperone activity | chaperonin-mediated tubulin folding | co-chaperone activity | cytosol | protein binding | protein folding | tubulin-specific chaperone activity
Human Homolog	PFDN4[prefoldin 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTATTAAAAT (6) 11.4 0.0114 P8 Cb GC CTGGCAGATG (3) 3.3 0.0033 P8 Cb GC CTGGAGATGG (8) 1.6 0.0016 P8 Cb GC TATGTATTTG (2) 1.6 0.0016 Cb medulloblastoma TTATTAAAAT (6) 9.2 0.0092 Cb medulloblastoma CTGGAGATGG (8) 2.3 0.0023 Cb medulloblastoma TATGTATTTG (2) 2.3 0.0023 P8 GC+1d culture TTATTAAAAT (6) 12.6 0.0126 P8 GC+1d culture TATGTATTTG (2) 5.7 0.0057 P8 GC+1d culture CTGGAGATGG (8) 2.3 0.0023 P8 GC+SHH+1d culture TTATTAAAAT (6) 26.9 0.0269 P8 GC+SHH+1d culture CTGGAGATGG (8) 3.5 0.0035 P8 GC+SHH+1d culture TATGTATTTG (2) 3.5 0.0035 P8 GC+SHH+1d culture TGAAAATAGG (2) 3.5 0.0035 3T3 fibroblasts CTGGAGATGG (8) 3.5 0.0035 E15 cortex TATGTATTTG (2) 4.9 0.0049 P1 cortex TTATTAAAAT (6) 13.6 0.0136 P1 cortex TATGTATTTG (2) 4.5 0.0045 P1 cortex TGAAAATAGG (2) 4.5 0.0045 Hypothalamus TTATTAAAAT (6) 10.9 0.0109 Hypothalamus CTGGAGATGG (8) 3.6 0.0036 Hypothalamus TGAAAATAGG (2) 3.6 0.0036 Hypothalamus TATGTATTTG (2) 1.8 0.0018 E12.5 retina TTATTAAAAT (6) 9.4 0.0094 E12.5 retina CTGGAGATGG (8) 1.9 0.0019 E12.5 retina TATGTATTTG (2) 1.9 0.0019 E12.5 retina TGAAAATAGG (2) 1.9 0.0019 E14.5 retina TTATTAAAAT (6) 14.6 0.0146 E14.5 retina CTGGAGATGG (8) 5.5 0.0055 E14.5 retina GAATGGAATT (2) 5.5 0.0055 E14.5 retina CTGGGAGATG (6) 1.8 0.0018 E14.5 retina TATGTATTTG (2) 1.8 0.0018 E16.5 retina TTATTAAAAT (6) 12.7 0.0127 E16.5 retina CTGGAGATGG (8) 1.8 0.0018 E16.5 retina CTGGCAGATG (3) 1.8 0.0018 E16.5 retina TATGTATTTG (2) 1.8 0.0018 E18.5 retina TTATTAAAAT (6) 29.1 0.0291 E18.5 retina CTGGCAGATG (3) 1.8 0.0018 E18.5 retina TATGTATTTG (2) 1.8 0.0018 P0.5 retina TTATTAAAAT (6) 5.9 0.0059 P0.5 retina CTGGAGATGG (8) 2 0.002 P0.5 retina TGAAAATAGG (2) 2 0.002 P2.5 retina TTATTAAAAT (6) 10.6 0.0106 P2.5 retina CTGGAGATGG (8) 3.5 0.0035 P2.5 retina CTGGCAGATG (3) 1.8 0.0018 P2.5 retina TATGTATTTG (2) 1.8 0.0018 P4.5 retina TTATTAAAAT (6) 11.9 0.0119 P4.5 retina CTGGAGATGG (8) 9.9 0.0099 P4.5 retina CTGGGAGATG (6) 5.9 0.0059 P4.5 retina TATGTATTTG (2) 5.9 0.0059 P6.5 retina TTATTAAAAT (6) 23.3 0.0233 P6.5 retina CTGGAGATGG (8) 3.3 0.0033 P6.5 retina TGAAAATAGG (2) 3.3 0.0033 P6.5 retina GAATGGAATT (2) 1.7 0.0017 P10.5 crx- retina CTGGAGATGG (8) 16.7 0.0167 P10.5 crx- retina TTATTAAAAT (6) 9.3 0.0093 P10.5 crx- retina TATGTATTTG (2) 7.4 0.0074 P10.5 crx- retina TGAAAATAGG (2) 3.7 0.0037 P10.5 crx+ retina TTATTAAAAT (6) 9.6 0.0096 P10.5 crx+ retina TATGTATTTG (2) 7.7 0.0077 P10.5 crx+ retina CTGGAGATGG (8) 5.8 0.0058 P10.5 crx+ retina TGAAAATAGG (2) 5.8 0.0058 Adult retinal CTGGAGATGG (8) 7.4 0.0074 Adult retinal TTATTAAAAT (6) 5.6 0.0056 Adult retinal CTGGCAGATG (3) 1.9 0.0019 Adult retinal TATGTATTTG (2) 1.9 0.0019 ONL CTGGAGATGG (8) 7.7 0.0077 ONL TTATTAAAAT (6) 7.7 0.0077 ONL CTGGCAGATG (3) 1.9 0.0019 ONL TATGTATTTG (2) 1.9 0.0019 ONL TGAAAATAGG (2) 1.9 0.0019