Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288098	Clk2	CDC-like kinase 2	3	3 F1	12748
Gene Ontology	ATP binding | autophosphorylation | kinase activity | nucleus | peptidyl-tyrosine phosphorylation | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	CLK2[CDC-like kinase 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGAGGTGGA (7) 3.3 0.0033 P8 Cb GC CAAGCGGAAG (2) 1.6 0.0016 P8 Cb GC CTTCATCTGA (2) 1.6 0.0016 P8 Cb GC TCAGGGGTTG 1.6 0.0016 Cb medulloblastoma AAAGGAAAAA (15) 6.9 0.0069 P8 GC+1d culture TATATACTAC (2) 4.6 0.0046 P8 GC+1d culture ATGGAAAGGA (8) 1.1 0.0011 P8 GC+1d culture CAAGCGGAAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTTCATCTGA (2) 8.2 0.0082 P8 GC+SHH+1d culture TATATACTAC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAAGGAAAAA (15) 1.2 0.0012 P8 GC+SHH+1d culture ATGGAAAGGA (8) 1.2 0.0012 P8 GC+SHH+1d culture CAAGCGGAAG (2) 1.2 0.0012 3T3 fibroblasts ATGGAAAGGA (8) 3.5 0.0035 3T3 fibroblasts GCTGTGACCA (3) 3.5 0.0035 E15 cortex AAAGGAAAAA (15) 4.9 0.0049 E15 cortex CTTCATCTGA (2) 4.9 0.0049 P1 cortex CAAGCGGAAG (2) 9.1 0.0091 P1 cortex CTTCAAAAAA (6) 4.5 0.0045 Hypothalamus GCTGTGACCA (3) 9.1 0.0091 Hypothalamus AAAGGAAAAA (15) 1.8 0.0018 Hypothalamus ATGGAAAGAA (12) 1.8 0.0018 E12.5 retina CTTCATCTGA (2) 5.6 0.0056 E14.5 retina CTTCATCTGA (2) 7.3 0.0073 E14.5 retina ATGGAAAGAA (12) 1.8 0.0018 E14.5 retina CTTCAAAAAA (6) 1.8 0.0018 E14.5 retina TGGAGGTGGA (7) 1.8 0.0018 E16.5 retina CTTCATCTGA (2) 7.2 0.0072 E16.5 retina AAAGGAAAAA (15) 1.8 0.0018 E16.5 retina ATGGAAAGGA (8) 1.8 0.0018 E16.5 retina CTTCAAAAAA (6) 1.8 0.0018 E16.5 retina TATATACTAC (2) 1.8 0.0018 E18.5 retina CTTCATCTGA (2) 14.6 0.0146 E18.5 retina AAAGGAAAAA (15) 3.6 0.0036 E18.5 retina TGGAGGTGGA (7) 3.6 0.0036 E18.5 retina CTTCAAAAAA (6) 1.8 0.0018 P0.5 retina CTTCATCTGA (2) 7.9 0.0079 P0.5 retina TATATACTAC (2) 3.9 0.0039 P0.5 retina ATGGAAAGAA (12) 2 0.002 P0.5 retina CTTCAAAAAA (6) 2 0.002 P0.5 retina TGGAGGTGGA (7) 2 0.002 P2.5 retina CTTCATCTGA (2) 14.1 0.0141 P2.5 retina CTTCAAAAAA (6) 1.8 0.0018 P4.5 retina CTTCATCTGA (2) 9.9 0.0099 P4.5 retina AAAGGAAAAA (15) 4 0.004 P4.5 retina ATGGAAAGGA (8) 4 0.004 P6.5 retina CTTCATCTGA (2) 3.3 0.0033 P6.5 retina GCTGTGACCA (3) 3.3 0.0033 P6.5 retina ATGGAAAGAA (12) 1.7 0.0017 P10.5 crx- retina CTTCATCTGA (2) 7.4 0.0074 P10.5 crx- retina CAAGCGGAAG (2) 1.9 0.0019 P10.5 crx- retina GCTGTGACCA (3) 1.9 0.0019 P10.5 crx- retina TATATACTAC (2) 1.9 0.0019 P10.5 crx+ retina CAAGCGGAAG (2) 5.8 0.0058 P10.5 crx+ retina GCTGTGACCA (3) 3.8 0.0038 P10.5 crx+ retina AAAGGAAAAA (15) 1.9 0.0019 P10.5 crx+ retina CTTCATCTGA (2) 1.9 0.0019 P10.5 crx+ retina TCAGGGGTTG 1.9 0.0019 Adult retinal GCTGTGACCA (3) 5.6 0.0056 Adult retinal CTTCATCTGA (2) 3.7 0.0037 Adult retinal TATATACTAC (2) 3.7 0.0037 Adult retinal TCAGGGGTTG 1.9 0.0019 ONL CTTCAAAAAA (6) 1.9 0.0019 ONL TATATACTAC (2) 1.9 0.0019 ONL TGGAGGTGGA (7) 1.9 0.0019