Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288179	Lig1	ligase I, DNA, ATP-dependent	7	7 4.0 cM	16881
Gene Ontology	ATP binding | DNA ligase (ATP) activity | DNA recombination | DNA repair | DNA replication | ligase activity | nucleic acid binding | nucleus
Human Homolog	LIG1[ligase I, DNA, ATP-dependent]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCACTGTTG (2) 4.9 0.0049 P8 Cb GC GCCAAGAAGA (4) 3.3 0.0033 P8 Cb GC CTGACACCCC 1.6 0.0016 P8 Cb GC TTCTGGAAGG (2) 1.6 0.0016 Cb medulloblastoma GGCACTGTTG (2) 2.3 0.0023 P8 GC+1d culture GGCACTGTTG (2) 4.6 0.0046 P8 GC+SHH+1d culture GGCACTGTTG (2) 11.7 0.0117 P8 GC+SHH+1d culture CTGACACCCC 1.2 0.0012 3T3 fibroblasts GCCAAGAAGA (4) 3.5 0.0035 3T3 fibroblasts GGCACTGTTG (2) 3.5 0.0035 Hypothalamus GGCACTGTTG (2) 1.8 0.0018 E12.5 retina GGCACTGTTG (2) 18.8 0.0188 E14.5 retina GGCACTGTTG (2) 7.3 0.0073 E16.5 retina GGCACTGTTG (2) 9.1 0.0091 E16.5 retina TTCTGGAAGG (2) 3.6 0.0036 E18.5 retina GGCACTGTTG (2) 9.1 0.0091 P0.5 retina GGCACTGTTG (2) 11.8 0.0118 P2.5 retina GGCACTGTTG (2) 5.3 0.0053 P4.5 retina TTCTGGAAGG (2) 2 0.002 P6.5 retina GGCACTGTTG (2) 3.3 0.0033 P10.5 crx- retina GGCACTGTTG (2) 3.7 0.0037 Adult retinal CTGACACCCC 1.9 0.0019 Adult retinal GGCTTTGTTG 1.9 0.0019 ONL GGCTTTGTTG 3.8 0.0038