Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288212	Rps15a	ribosomal protein S15a	7		267019
Mm.288212	Rps15	ribosomal protein S15	10		20054
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | ribosome biogenesis | small ribosomal subunit | structural constituent of ribosome
Human Homolog	RPS15[ribosomal protein S15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 126 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAGGCAAG (5) 217 0.217 P8 Cb GC GCCTCTGCAT (29) 8.2 0.0082 P8 Cb GC AAGAGGCGAG (3) 6.5 0.0065 P8 Cb GC AAGAGGCAGG (2) 3.3 0.0033 P8 Cb GC GGTGCAGTGC (4) 3.3 0.0033 P8 Cb GC TGTGTGTGAA (9) 1.6 0.0016 Cb medulloblastoma AAGAGGCAAG (5) 78.6 0.0786 Cb medulloblastoma GCCTCTGCAT (29) 6.9 0.0069 Cb medulloblastoma ACCCAAAAAA (5) 4.6 0.0046 Cb medulloblastoma GGTGCAGTGC (4) 2.3 0.0023 Cb medulloblastoma TGTGTGTGAA (9) 2.3 0.0023 P8 GC+1d culture AAGAGGCAAG (5) 149.5 0.1495 P8 GC+1d culture GCCTCTGCAT (29) 20.5 0.0205 P8 GC+1d culture AAGAGGGCAA (5) 2.3 0.0023 P8 GC+1d culture CAGGAAAGTT (3) 2.3 0.0023 P8 GC+1d culture TGTGTGTGAA (9) 2.3 0.0023 P8 GC+1d culture AAGAGGCGAG (3) 1.1 0.0011 P8 GC+1d culture GGTGCAGTGC (4) 1.1 0.0011 P8 GC+1d culture GTCCATAATG (2) 1.1 0.0011 P8 GC+SHH+1d culture AAGAGGCAAG (5) 134.7 0.1347 P8 GC+SHH+1d culture GCCTCTGCAT (29) 9.4 0.0094 P8 GC+SHH+1d culture GGTGCAGTGC (4) 2.3 0.0023 P8 GC+SHH+1d culture TTCTGAAGTC (3) 1.2 0.0012 3T3 fibroblasts AAGAGGCAAG (5) 59.6 0.0596 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GCCTCTGCAT (29) 7 0.007 3T3 fibroblasts GCCTGATGAG (2) 3.5 0.0035 3T3 fibroblasts GGTGCAGTGC (4) 3.5 0.0035 3T3 fibroblasts GTCCATAATG (2) 3.5 0.0035 E15 cortex GCCTCTGCAT (29) 39.6 0.0396 E15 cortex AAGAGGCAAG (5) 34.6 0.0346 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GCCTCTGCAT (29) 18.2 0.0182 P1 cortex AAGAGGCAAG (5) 13.6 0.0136 P1 cortex TGTGTGTGAA (9) 4.5 0.0045 Hypothalamus AAGAGGCAAG (5) 56.1 0.0561 Hypothalamus GCCTCTGCAT (29) 10.9 0.0109 Hypothalamus ACCCAAAAAA (5) 1.8 0.0018 Hypothalamus GCCTGATGAG (2) 1.8 0.0018 Hypothalamus TGTGTGTGAA (9) 1.8 0.0018 E12.5 retina AAGAGGCAAG (5) 341.7 0.3417 E12.5 retina GCCTCTGCAT (29) 11.3 0.0113 E12.5 retina GGTGCAGTGC (4) 3.8 0.0038 E12.5 retina GTCCATAATG (2) 3.8 0.0038 E12.5 retina AAAAGGCAAG (3) 1.9 0.0019 E12.5 retina GCCTGATGAG (2) 1.9 0.0019 E12.5 retina TGTGTGTGAA (9) 1.9 0.0019 E12.5 retina TTCTAAAGTC (9) 1.9 0.0019 E14.5 retina AAGAGGCAAG (5) 147.6 0.1476 E14.5 retina GCCTCTGCAT (29) 14.6 0.0146 E14.5 retina GTCCATAATG (2) 5.5 0.0055 E14.5 retina TGTGTGTGAA (9) 5.5 0.0055 E14.5 retina AAGAGGCAGG (2) 1.8 0.0018 E14.5 retina ACCCAAAAAA (5) 1.8 0.0018 E14.5 retina TTCTAAAGTC (9) 1.8 0.0018 E16.5 retina AAGAGGCAAG (5) 128.6 0.1286 E16.5 retina GCCTCTGCAT (29) 16.3 0.0163 E16.5 retina TGTGTGTGAA (9) 5.4 0.0054 E16.5 retina GCCTGATGAG (2) 3.6 0.0036 E16.5 retina GTCCATAATG (2) 3.6 0.0036 E16.5 retina TTCTAAAGTC (9) 3.6 0.0036 E16.5 retina AAAAGGCAAG (3) 1.8 0.0018 E16.5 retina GGTGCAGTGC (4) 1.8 0.0018 E18.5 retina AAGAGGCAAG (5) 223.7 0.2237 E18.5 retina GCCTCTGCAT (29) 9.1 0.0091 E18.5 retina GCCTGATGAG (2) 7.3 0.0073 E18.5 retina GTCCATAATG (2) 3.6 0.0036 E18.5 retina TGTGTGTGAA (9) 3.6 0.0036 E18.5 retina AAGAGGCAGG (2) 1.8 0.0018 P0.5 retina AAGAGGCAAG (5) 155 0.155 P0.5 retina GCCTCTGCAT (29) 23.6 0.0236 P0.5 retina TGTGTGTGAA (9) 7.9 0.0079 P0.5 retina AAAAGGCAAG (3) 3.9 0.0039 P0.5 retina GCCTGATGAG (2) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAGAGGCAGG (2) 2 0.002 P0.5 retina GTCCATAATG (2) 2 0.002 P0.5 retina TGGGTGAGGG (8) 2 0.002 P2.5 retina AAGAGGCAAG (5) 121.4 0.1214 P2.5 retina GCCTCTGCAT (29) 31.7 0.0317 P2.5 retina GCCTGATGAG (2) 3.5 0.0035 P2.5 retina AAGAGGCAGG (2) 1.8 0.0018 P2.5 retina ACCCAAAAAA (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGGGTGAGGG (8) 1.8 0.0018 P2.5 retina TGTGTGTGAA (9) 1.8 0.0018 P4.5 retina AAGAGGCAAG (5) 83.2 0.0832 P4.5 retina GCCTCTGCAT (29) 19.8 0.0198 P4.5 retina TGTGTGTGAA (9) 9.9 0.0099 P4.5 retina GCCTGATGAG (2) 5.9 0.0059 P4.5 retina AAGAGGCAGA (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTCTGAAGTC (3) 2 0.002 P6.5 retina AAGAGGCAAG (5) 83.4 0.0834 P6.5 retina GCCTCTGCAT (29) 21.7 0.0217 P6.5 retina TGTGTGTGAA (9) 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCCTGATGAG (2) 1.7 0.0017 P10.5 crx- retina AAGAGGCAAG (5) 102.2 0.1022 P10.5 crx- retina GCCTCTGCAT (29) 27.9 0.0279 P10.5 crx- retina AAGAGGCGAG (3) 1.9 0.0019 P10.5 crx- retina AAGAGGGCAA (5) 1.9 0.0019 P10.5 crx- retina GCCTGATGAG (2) 1.9 0.0019 P10.5 crx- retina GGTGCAGTGC (4) 1.9 0.0019 P10.5 crx- retina TGTGTGTGAA (9) 1.9 0.0019 P10.5 crx- retina TTCTAAAGTC (9) 1.9 0.0019 P10.5 crx+ retina AAGAGGCAAG (5) 86.5 0.0865 P10.5 crx+ retina GCCTCTGCAT (29) 32.7 0.0327 P10.5 crx+ retina GGTGCAGTGC (4) 5.8 0.0058 P10.5 crx+ retina CAGGAAAGTT (3) 3.8 0.0038 P10.5 crx+ retina GCCTGATGAG (2) 1.9 0.0019 P10.5 crx+ retina TTCTGAAGTC (3) 1.9 0.0019 Adult retinal AAGAGGCAAG (5) 33.3 0.0333 Adult retinal GCCTCTGCAT (29) 33.3 0.0333 Adult retinal TGTGTGTGAA (9) 5.6 0.0056 Adult retinal GGTGCAGTGC (4) 3.7 0.0037 Adult retinal AAAAGGCAAG (3) 1.9 0.0019 Adult retinal GCCTGATGAG (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGGGTGAGGG (8) 1.9 0.0019 ONL AAGAGGCAAG (5) 47.9 0.0479 ONL GCCTCTGCAT (29) 17.2 0.0172 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAGAGGCAGA (7) 3.8 0.0038 ONL AAGAGGCAGG (2) 1.9 0.0019 ONL TGTGTGTGAA (9) 1.9 0.0019