Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28835	Tnfsf13b	tumor necrosis factor (ligand) superfamily, member 13b	8	8 3.0 cM	24099
Gene Ontology	cytokine activity | immune response | integral to membrane | membrane | tumor necrosis factor receptor binding
Human Homolog	TNFSF13B[tumor necrosis factor (ligand) superfamily, member 13b]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGATAATGG (16) 4.9 0.0049 P8 Cb GC CCTGCCTGGA (5) 1.6 0.0016 P8 Cb GC TCATCCAGAG (2) 1.6 0.0016 Cb medulloblastoma CCTGCCTGGA (5) 6.9 0.0069 P8 GC+1d culture ATGATAATGG (16) 3.4 0.0034 P8 GC+1d culture CCTGCCTGGA (5) 2.3 0.0023 P8 GC+1d culture GAGCTGCAGA (6) 1.1 0.0011 P8 GC+1d culture TCATCCAGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture ATGATAATGG (16) 3.5 0.0035 P8 GC+SHH+1d culture CCTGCCTGGA (5) 1.2 0.0012 E15 cortex ATGATAATGG (16) 4.9 0.0049 E15 cortex CCTGCCTGGA (5) 4.9 0.0049 P1 cortex ATGATAATGG (16) 9.1 0.0091 P1 cortex GAGCTGCAGA (6) 9.1 0.0091 Hypothalamus ATGATAATGG (16) 19.9 0.0199 Hypothalamus CCTGCCTGGA (5) 1.8 0.0018 E12.5 retina ATGATAATGG (16) 1.9 0.0019 E14.5 retina ATGATAATGG (16) 18.2 0.0182 E14.5 retina AGAAGAGGGC (2) 3.6 0.0036 E14.5 retina CCTGCCTGGA (5) 1.8 0.0018 E16.5 retina ATGATAATGG (16) 19.9 0.0199 E16.5 retina CCTGCCTGGA (5) 5.4 0.0054 E16.5 retina AGAAGAGGGC (2) 1.8 0.0018 E18.5 retina ATGATAATGG (16) 14.6 0.0146 P0.5 retina ATGATAATGG (16) 7.9 0.0079 P0.5 retina CCTGCCTGGA (5) 2 0.002 P0.5 retina TCATCCAGAG (2) 2 0.002 P2.5 retina ATGATAATGG (16) 7 0.007 P2.5 retina CCTGCCTGGA (5) 5.3 0.0053 P4.5 retina ATGATAATGG (16) 9.9 0.0099 P4.5 retina CCTGCCTGGA (5) 4 0.004 P6.5 retina ATGATAATGG (16) 8.3 0.0083 P6.5 retina CCTGCCTGGA (5) 6.7 0.0067 P10.5 crx- retina CCTGCCTGGA (5) 3.7 0.0037 P10.5 crx- retina ATGATAATGG (16) 1.9 0.0019 P10.5 crx+ retina CCTGCCTGGA (5) 5.8 0.0058 P10.5 crx+ retina ATGATAATGG (16) 3.8 0.0038 P10.5 crx+ retina GAGCTGCAGA (6) 1.9 0.0019 Adult retinal ATGATAATGG (16) 9.3 0.0093 Adult retinal CCTGCCTGGA (5) 3.7 0.0037 ONL ATGATAATGG (16) 11.5 0.0115 ONL CCTGCCTGGA (5) 5.7 0.0057 ONL AGAAGAGGGC (2) 1.9 0.0019