Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28850
Praf2
PRA1 domain family 2
X
X 1.6 cM
54637
Gene Ontology
integral to membrane
Human Homolog
PRAF2[PRA1 domain family 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGGGCTGGC
(
3
)
13.1
0.0131
P8 Cb GC
TGGGGTTGGC
(
6
)
1.6
0.0016
Cb medulloblastoma
TGGGGCTGGC
(
3
)
23.1
0.0231
Cb medulloblastoma
CTTCACTGCG
2.3
0.0023
P8 GC+1d culture
TGGGGCTGGC
(
3
)
20.5
0.0205
P8 GC+1d culture
CTTCACTGCG
2.3
0.0023
P8 GC+SHH+1d culture
TGGGGCTGGC
(
3
)
30.4
0.0304
3T3 fibroblasts
TGGGGCTGGC
(
3
)
31.5
0.0315
E15 cortex
TGGGGCTGGC
(
3
)
14.8
0.0148
E15 cortex
TGGGGTTGGC
(
6
)
4.9
0.0049
P1 cortex
TGGGGCTGGC
(
3
)
22.7
0.0227
P1 cortex
CGAGTTCATA (
2
)
4.5
0.0045
Hypothalamus
TGGGGCTGGC
(
3
)
25.4
0.0254
Hypothalamus
CGAGTTCATA (
2
)
1.8
0.0018
Hypothalamus
CTTCACTGCG
1.8
0.0018
E12.5 retina
TGGGGCTGGC
(
3
)
9.4
0.0094
E12.5 retina
CGAGTTCATA (
2
)
3.8
0.0038
E12.5 retina
TGGGGTGGCT (
2
)
1.9
0.0019
E14.5 retina
TGGGGCTGGC
(
3
)
10.9
0.0109
E16.5 retina
TGGGGCTGGC
(
3
)
18.1
0.0181
E18.5 retina
TGGGGCTGGC
(
3
)
5.5
0.0055
P0.5 retina
TGGGGCTGGC
(
3
)
15.7
0.0157
P2.5 retina
TGGGGCTGGC
(
3
)
10.6
0.0106
P2.5 retina
CGAGTTCATA (
2
)
1.8
0.0018
P2.5 retina
TGGGGTTGGC
(
6
)
1.8
0.0018
P4.5 retina
TGGGGCTGGC
(
3
)
11.9
0.0119
P6.5 retina
TGGGGCTGGC
(
3
)
10
0.01
P6.5 retina
CGAGTTCATA (
2
)
3.3
0.0033
P10.5 crx- retina
TGGGGCTGGC
(
3
)
26
0.026
P10.5 crx- retina
TGGGGTTGGC
(
6
)
3.7
0.0037
P10.5 crx- retina
CTTCACTGCG
1.9
0.0019
P10.5 crx+ retina
TGGGGCTGGC
(
3
)
38.4
0.0384
Adult retinal
TGGGGCTGGC
(
3
)
18.5
0.0185
Adult retinal
TGGGGTGGCT (
2
)
3.7
0.0037
Adult retinal
TGGGGTTGGC
(
6
)
1.9
0.0019
ONL
CGAGTTCATA (
2
)
1.9
0.0019
ONL
TGGGGCTGGC
(
3
)
1.9
0.0019
