Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288639	Rabgef1	RAB guanine nucleotide exchange factor (GEF) 1	5	5 F	56715
Gene Ontology	cellular_component unknown | DNA binding | endocytosis | protein transport | transport | zinc ion binding
Human Homolog	RABGEF1[RAB guanine nucleotide exchange factor (GEF) 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACACACAGT (3) 1.6 0.0016 P8 Cb GC GGCTTCCTCT (7) 1.6 0.0016 Cb medulloblastoma AACACACAGT (3) 2.3 0.0023 Cb medulloblastoma CAGGTGCTGG (7) 2.3 0.0023 Cb medulloblastoma CCCAGCTTTT (11) 2.3 0.0023 P8 GC+1d culture TACCAGAAAG (5) 2.3 0.0023 P8 GC+SHH+1d culture AACACACAGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TGGATCAATC 1.2 0.0012 3T3 fibroblasts GGCTTCCTCT (7) 3.5 0.0035 E15 cortex AACACACAGT (3) 4.9 0.0049 P1 cortex AACACACAGT (3) 4.5 0.0045 Hypothalamus CCCAGCTTTT (11) 1.8 0.0018 E12.5 retina TACCAGAAAG (5) 9.4 0.0094 E12.5 retina TGGATCAATC 1.9 0.0019 E14.5 retina CAGGTGCTGG (7) 1.8 0.0018 E16.5 retina CAGGTGCTGG (7) 1.8 0.0018 E18.5 retina CCCAGCTTTT (11) 1.8 0.0018 P0.5 retina TGGATCAATC 2 0.002 P2.5 retina TGGATCAATC 7 0.007 P2.5 retina AACACACAGT (3) 1.8 0.0018 P2.5 retina TACCAGAAAG (5) 1.8 0.0018 P4.5 retina TACCAGAAAG (5) 2 0.002 P10.5 crx- retina AACACACAGT (3) 3.7 0.0037 P10.5 crx- retina TGGATCAATC 3.7 0.0037 P10.5 crx+ retina AACACACAGT (3) 11.5 0.0115 P10.5 crx+ retina GGCTTCCTCT (7) 1.9 0.0019 P10.5 crx+ retina TACCAGAAAG (5) 1.9 0.0019 Adult retinal AACACACAGT (3) 24.1 0.0241 Adult retinal TACCAGAAAG (5) 7.4 0.0074 Adult retinal TGGATCAATC 5.6 0.0056 Adult retinal CCCAGCTTTT (11) 1.9 0.0019 Adult retinal GGCTTCCTCT (7) 1.9 0.0019 ONL AACACACAGT (3) 11.5 0.0115 ONL TACCAGAAAG (5) 7.7 0.0077 ONL GGCTTCCTCT (7) 1.9 0.0019