Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28864
4933424M23Rik
RIKEN cDNA 4933424M23 gene
11
74451
Mm.28864
LOC260345
silencer-associated factor (Saf) pseudogene
260345
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGAATGGCA
(
10
)
8.2
0.0082
P8 Cb GC
AGCTGCTGGC (
7
)
3.3
0.0033
Cb medulloblastoma
GAGAATGGCA
(
10
)
23.1
0.0231
Cb medulloblastoma
GGGACCTGGG (
4
)
4.6
0.0046
Cb medulloblastoma
AGCTGCTGGC (
7
)
2.3
0.0023
P8 GC+1d culture
GAGAATGGCA
(
10
)
5.7
0.0057
P8 GC+1d culture
AGCTGCTGGC (
7
)
1.1
0.0011
P8 GC+1d culture
GAGAATGGCT
(
9
)
1.1
0.0011
P8 GC+SHH+1d culture
AGCTGCTGGC (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGAATGGCA
(
10
)
1.2
0.0012
P8 GC+SHH+1d culture
GTATGGAAAA (
5
)
1.2
0.0012
3T3 fibroblasts
AGCTGCTGGC (
7
)
3.5
0.0035
E15 cortex
AGCTGCTGGC (
7
)
9.9
0.0099
E15 cortex
TGTGTGGGCT (
3
)
4.9
0.0049
Hypothalamus
GAGAATGGCA
(
10
)
18.1
0.0181
Hypothalamus
AGCTGCTGGC (
7
)
1.8
0.0018
Hypothalamus
GAGAATGGCT
(
9
)
1.8
0.0018
Hypothalamus
GTATGGAAAA (
5
)
1.8
0.0018
E12.5 retina
AGCTGCTGGC (
7
)
3.8
0.0038
E12.5 retina
GAGAATGGCA
(
10
)
1.9
0.0019
E14.5 retina
GAGAATGGCA
(
10
)
3.6
0.0036
E14.5 retina
GTATGGAAAA (
5
)
1.8
0.0018
E16.5 retina
GAGAATGGCA
(
10
)
5.4
0.0054
E16.5 retina
AGCTGCTGGC (
7
)
1.8
0.0018
E16.5 retina
GTATGGAAAA (
5
)
1.8
0.0018
E18.5 retina
GAGAATGGCA
(
10
)
14.6
0.0146
E18.5 retina
GTATGGAAAA (
5
)
3.6
0.0036
E18.5 retina
AGCTGCTGGC (
7
)
1.8
0.0018
E18.5 retina
GGGACCTGGG (
4
)
1.8
0.0018
P0.5 retina
AGCTGCTGGC (
7
)
9.8
0.0098
P0.5 retina
GAGAATGGCA
(
10
)
9.8
0.0098
P0.5 retina
GGGACCTGGG (
4
)
2
0.002
P2.5 retina
GAGAATGGCA
(
10
)
10.6
0.0106
P4.5 retina
GAGAATGGCA
(
10
)
13.9
0.0139
P4.5 retina
GAGAATGAAA
(
7
)
2
0.002
P6.5 retina
GAGAATGGCA
(
10
)
10
0.01
P6.5 retina
GTATGGAAAA (
5
)
5
0.005
P6.5 retina
GAGAATGGCT
(
9
)
1.7
0.0017
P10.5 crx- retina
GGGACCTGGG (
4
)
5.6
0.0056
P10.5 crx- retina
AGCTGCTGGC (
7
)
1.9
0.0019
P10.5 crx- retina
GAGAATGAAA
(
7
)
1.9
0.0019
P10.5 crx- retina
GAGAATGGCA
(
10
)
1.9
0.0019
P10.5 crx+ retina
GAGAATGGCA
(
10
)
3.8
0.0038
P10.5 crx+ retina
GGGACCTGGG (
4
)
1.9
0.0019
Adult retinal
GAGAATGGCA
(
10
)
9.3
0.0093
Adult retinal
GGGACCTGGG (
4
)
1.9
0.0019
ONL
GAGAATGGCA
(
10
)
5.7
0.0057
ONL
TGTGTGGGCT (
3
)
3.8
0.0038
