Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.288689
Myohd1
myosin head domain containing 1
11
66196
Mm.288689
Trip3
thyroid hormone receptor interactor 3
11
448850
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGAAATGTT (
5
)
1.6
0.0016
Cb medulloblastoma
GTGAAATGTT (
5
)
2.3
0.0023
Cb medulloblastoma
TGCATAGCCA
(
4
)
2.3
0.0023
P8 GC+1d culture
GTGAAATGTT (
5
)
4.6
0.0046
P8 GC+1d culture
TGCATAGCCA
(
4
)
4.6
0.0046
P8 GC+1d culture
GGCAGCCAGA (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
GGCAGCCAGA (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGAAATGTT (
5
)
2.3
0.0023
3T3 fibroblasts
GCCCAGAAGT
(
5
)
7
0.007
3T3 fibroblasts
GCCAGAGTGC
(
4
)
3.5
0.0035
E15 cortex
GCCAGAGTGC
(
4
)
9.9
0.0099
E15 cortex
GGCAGCCAGA (
8
)
9.9
0.0099
E15 cortex
TGCATAGCCA
(
4
)
4.9
0.0049
P1 cortex
GCCCAGAAGT
(
5
)
4.5
0.0045
P1 cortex
GTGAAATGTT (
5
)
4.5
0.0045
Hypothalamus
TGCATAGCCA
(
4
)
7.2
0.0072
E12.5 retina
GTGAAATGTT (
5
)
1.9
0.0019
E14.5 retina
GTGAAATGTT (
5
)
12.8
0.0128
E14.5 retina
TGCATAGCCA
(
4
)
1.8
0.0018
E16.5 retina
GTGAAATGTT (
5
)
5.4
0.0054
E16.5 retina
GCCAGAGTGC
(
4
)
1.8
0.0018
E16.5 retina
TGCATAGCCA
(
4
)
1.8
0.0018
E18.5 retina
TGCATAGCCA
(
4
)
1.8
0.0018
P0.5 retina
GGCAGCCAGA (
8
)
2
0.002
P0.5 retina
TGCATAGCCA
(
4
)
2
0.002
P2.5 retina
GTGAAATGTT (
5
)
3.5
0.0035
P4.5 retina
GTGAAATGTT (
5
)
9.9
0.0099
P4.5 retina
TGCATAGCCA
(
4
)
2
0.002
P6.5 retina
GTGAAATGTT (
5
)
5
0.005
P6.5 retina
TGCATAGCCA
(
4
)
3.3
0.0033
P6.5 retina
GCCAGAGTGC
(
4
)
1.7
0.0017
P10.5 crx- retina
GTGAAATGTT (
5
)
5.6
0.0056
P10.5 crx- retina
TGCATAGCCA
(
4
)
3.7
0.0037
P10.5 crx+ retina
GTGAAATGTT (
5
)
5.8
0.0058
P10.5 crx+ retina
TGCATAGCCA
(
4
)
3.8
0.0038
Adult retinal
TGCATAGCCA
(
4
)
3.7
0.0037
Adult retinal
GCCAGAGTGC
(
4
)
1.9
0.0019
ONL
TGCATAGCCA
(
4
)
5.7
0.0057
ONL
GGCAGCCAGA (
8
)
1.9
0.0019
