Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288924	Ube4b	ubiquitination factor E4B, UFD2 homolog (S. cerevisiae)	4	4 76.4 cM	63958
Gene Ontology	protein binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity
Human Homolog	UBE4B[ubiquitination factor E4B (UFD2 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTAATCAA (2) 11.4 0.0114 P8 Cb GC TAAACAAGCA (3) 3.3 0.0033 Cb medulloblastoma AATAATAAAA (4) 2.3 0.0023 Cb medulloblastoma ATTAATAAAA (2) 2.3 0.0023 Cb medulloblastoma GCCCGACAAC 2.3 0.0023 P8 GC+1d culture AATTAATCAA (2) 9.1 0.0091 P8 GC+1d culture TAAACAAGCA (3) 2.3 0.0023 P8 GC+1d culture GCCCGACGAC (3) 1.1 0.0011 P8 GC+1d culture TAAAGTAAGA 1.1 0.0011 P8 GC+1d culture TATTCTGTGC (2) 1.1 0.0011 P8 GC+1d culture TCATCTAACA (2) 1.1 0.0011 P8 GC+SHH+1d culture AATTAATCAA (2) 7 0.007 P8 GC+SHH+1d culture GCCCGACAAC 3.5 0.0035 P8 GC+SHH+1d culture GCCCGACGAC (3) 3.5 0.0035 P8 GC+SHH+1d culture TCATCTAACA (2) 3.5 0.0035 P8 GC+SHH+1d culture AATAATAAAA (4) 2.3 0.0023 P8 GC+SHH+1d culture ATTAATAAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TAAACAAGCA (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGGAGCCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TAAAGTAAGA 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GCCCGACAAC 29.7 0.0297 E15 cortex GCACTTCCAG (2) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TATTCTGTGC (2) 4.9 0.0049 P1 cortex AATAATAAAA (4) 4.5 0.0045 P1 cortex AATTAATCAA (2) 4.5 0.0045 P1 cortex ATTAATAAAA (2) 4.5 0.0045 P1 cortex TAAACAAGCA (3) 4.5 0.0045 Hypothalamus AATAATAAAA (4) 5.4 0.0054 Hypothalamus TAAACAAGCA (3) 3.6 0.0036 E12.5 retina AATTAATCAA (2) 7.5 0.0075 E12.5 retina TAAACAAGCA (3) 5.6 0.0056 E12.5 retina ATTAATAAAA (2) 3.8 0.0038 E12.5 retina AATAATAAAA (4) 1.9 0.0019 E12.5 retina CTGGAGCCAG (3) 1.9 0.0019 E14.5 retina AATTAATCAA (2) 12.8 0.0128 E14.5 retina ATTAATAAAA (2) 1.8 0.0018 E14.5 retina GCAGGAGTCC (3) 1.8 0.0018 E14.5 retina TAAACAAGCA (3) 1.8 0.0018 E16.5 retina GCCCGACAAC 3.6 0.0036 E16.5 retina TAAACAAGCA (3) 1.8 0.0018 E18.5 retina AATTAATCAA (2) 1.8 0.0018 E18.5 retina TAAACAAGCA (3) 1.8 0.0018 E18.5 retina TATTCTGTGC (2) 1.8 0.0018 P0.5 retina GCCCGACAAC 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AATTAATCAA (2) 2 0.002 P0.5 retina ATTAATAAAA (2) 2 0.002 P0.5 retina CTGGAGCCAG (3) 2 0.002 P2.5 retina AATAATAAAA (4) 8.8 0.0088 P2.5 retina AATTAATCAA (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina AATTAATCAA (2) 2 0.002 P4.5 retina ATTAATAAAA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TAAACAAGCA (3) 2 0.002 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AATTAATCAA (2) 1.7 0.0017 P6.5 retina ATTAATAAAA (2) 1.7 0.0017 P6.5 retina GCAGGAGTCC (3) 1.7 0.0017 P6.5 retina TAAACAAGCA (3) 1.7 0.0017 P10.5 crx- retina AATTAATCAA (2) 1.9 0.0019 P10.5 crx- retina GCCCGACAAC 1.9 0.0019 P10.5 crx- retina TAAACAAGCA (3) 1.9 0.0019 P10.5 crx- retina TATTCTGTGC (2) 1.9 0.0019 P10.5 crx+ retina GCCCGACAAC 1.9 0.0019 Adult retinal GCACTTCCAG (2) 1.9 0.0019 Adult retinal GCAGGAGTCC (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAAACAAGCA (3) 1.9 0.0019 ONL TAAACAAGCA (3) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GCACTTCCAG (2) 1.9 0.0019 ONL TAAAGTAAGA 1.9 0.0019