Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289082	Wdr26	WD repeat domain 26	1		226757
Human Homolog	WDR26[WD repeat domain 26]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 169 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TCAGTGCACA (2) 9.8 0.0098 P8 Cb GC TGCATTTCAA (2) 4.9 0.0049 P8 Cb GC CAAGGTGTGA (4) 3.3 0.0033 P8 Cb GC GATTCTAGCC 3.3 0.0033 P8 Cb GC TGCTTAAAAT 3.3 0.0033 P8 Cb GC ATGGCCAGTG 1.6 0.0016 P8 Cb GC CTTTTGGTTT (4) 1.6 0.0016 P8 Cb GC TATGTGATAT (7) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TCAGTGCACA (2) 4.6 0.0046 Cb medulloblastoma TGCATTTCAA (2) 4.6 0.0046 Cb medulloblastoma CAAGGTGTGA (4) 2.3 0.0023 Cb medulloblastoma TGGGCACAGA (3) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TCAGTGCACA (2) 12.6 0.0126 P8 GC+1d culture TGCATTTCAA (2) 5.7 0.0057 P8 GC+1d culture GATTCTAGCC 2.3 0.0023 P8 GC+1d culture TAAAGACGCT (3) 2.3 0.0023 P8 GC+1d culture TTTGATTTAT (5) 2.3 0.0023 P8 GC+1d culture ATGGCCAGTG 1.1 0.0011 P8 GC+1d culture CAAGGTGTGA (4) 1.1 0.0011 P8 GC+1d culture CTCTTAATAC (5) 1.1 0.0011 P8 GC+1d culture CTTTTGGTTT (4) 1.1 0.0011 P8 GC+1d culture TATGTGATAT (7) 1.1 0.0011 P8 GC+1d culture TGCTTAAAAT 1.1 0.0011 P8 GC+1d culture TTTTCCAATA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TCAGTGCACA (2) 8.2 0.0082 P8 GC+SHH+1d culture TGCATTTCAA (2) 7 0.007 P8 GC+SHH+1d culture CTCTTAATAC (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTGATTTAT (5) 3.5 0.0035 P8 GC+SHH+1d culture TGCTTAAAAT 2.3 0.0023 P8 GC+SHH+1d culture TGGGCACAGA (3) 2.3 0.0023 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TCAGTGCACA (2) 10.5 0.0105 3T3 fibroblasts ATCATATGCC 3.5 0.0035 3T3 fibroblasts TGCATTTCAA (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TCAGTGCACA (2) 4.9 0.0049 E15 cortex TGCATTTCAA (2) 4.9 0.0049 E15 cortex TGGGCACAGA (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGAAAATGTT (5) 9.1 0.0091 P1 cortex TGCATTTCAA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TTTGATTTAT (5) 7.2 0.0072 Hypothalamus TGCATTTCAA (2) 5.4 0.0054 Hypothalamus TCAGTGCACA (2) 3.6 0.0036 Hypothalamus TGAAAATGTT (5) 3.6 0.0036 Hypothalamus CTCTTAATAC (5) 1.8 0.0018 Hypothalamus CTTTTGGTTT (4) 1.8 0.0018 Hypothalamus TTTTTCAATA (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TCAGTGCACA (2) 11.3 0.0113 E12.5 retina TTTGATTTAT (5) 5.6 0.0056 E12.5 retina TGCATTTCAA (2) 3.8 0.0038 E12.5 retina GATTCTAGCC 1.9 0.0019 E12.5 retina TAAAGACGCT (3) 1.9 0.0019 E12.5 retina TGCTTAAAAT 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTGATTTAT (5) 27.3 0.0273 E14.5 retina TGCATTTCAA (2) 7.3 0.0073 E14.5 retina TATGTGATAT (7) 3.6 0.0036 E14.5 retina AAACAAGCTG (5) 1.8 0.0018 E14.5 retina CTTTTGGTTT (4) 1.8 0.0018 E14.5 retina TCAGTGCACA (2) 1.8 0.0018 E14.5 retina TGGGCACAGA (3) 1.8 0.0018 E14.5 retina TTTTTCAATA (6) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TTTGATTTAT (5) 18.1 0.0181 E16.5 retina TGCATTTCAA (2) 7.2 0.0072 E16.5 retina TCAGTGCACA (2) 5.4 0.0054 E16.5 retina CTTTTGGTTT (4) 3.6 0.0036 E16.5 retina TAAAGACGCT (3) 3.6 0.0036 E16.5 retina TGCTTAAAAT 3.6 0.0036 E16.5 retina ATCATATGCC 1.8 0.0018 E16.5 retina CAAGGTGTGA (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TCAGTGCACA (2) 5.5 0.0055 E18.5 retina TGCATTTCAA (2) 3.6 0.0036 E18.5 retina TTTGATTTAT (5) 3.6 0.0036 E18.5 retina CAAGGTGTGA (4) 1.8 0.0018 E18.5 retina CTTTTGGTTT (4) 1.8 0.0018 E18.5 retina GATTCTAGCC 1.8 0.0018 E18.5 retina TAAAGACGCT (3) 1.8 0.0018 E18.5 retina TGAAAATGTT (5) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCAGTGCACA (2) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina AAACAAGCTG (5) 2 0.002 P0.5 retina ATGGCCAGTG 2 0.002 P0.5 retina TAAAGACGCT (3) 2 0.002 P0.5 retina TGAAAATGTT (5) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TCAGTGCACA (2) 17.6 0.0176 P2.5 retina TGAAAATGTT (5) 5.3 0.0053 P2.5 retina GATTCTAGCC 3.5 0.0035 P2.5 retina TGCATTTCAA (2) 3.5 0.0035 P2.5 retina TGGGCACAGA (3) 3.5 0.0035 P2.5 retina CAAGGTGTGA (4) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGCTTAAAAT 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TCAGTGCACA (2) 7.9 0.0079 P4.5 retina TGAAAATGTT (5) 5.9 0.0059 P4.5 retina CAAGGTGTGA (4) 2 0.002 P4.5 retina CTTTTGGTTT (4) 2 0.002 P4.5 retina GATTCTAGCC 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGCATTTCAA (2) 2 0.002 P4.5 retina TTTTCCAATA (3) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina TCAGTGCACA (2) 31.7 0.0317 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGCATTTCAA (2) 3.3 0.0033 P6.5 retina TGGGCACAGA (3) 3.3 0.0033 P6.5 retina CAAGGTGTGA (4) 1.7 0.0017 P6.5 retina TAAAGACGCT (3) 1.7 0.0017 P6.5 retina TGCTTAAAAT 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TCAGTGCACA (2) 16.7 0.0167 P10.5 crx- retina TGCATTTCAA (2) 7.4 0.0074 P10.5 crx- retina TGCTTAAAAT 3.7 0.0037 P10.5 crx- retina ATCATATGCC 1.9 0.0019 P10.5 crx- retina ATGGCCAGTG 1.9 0.0019 P10.5 crx- retina TTTGATTTAT (5) 1.9 0.0019 P10.5 crx- retina TTTTCCAATA (3) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TCAGTGCACA (2) 7.7 0.0077 P10.5 crx+ retina CAAGGTGTGA (4) 3.8 0.0038 P10.5 crx+ retina TGCTTAAAAT 1.9 0.0019 P10.5 crx+ retina TGGGCACAGA (3) 1.9 0.0019 P10.5 crx+ retina TTTGATTTAT (5) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal AAACAAGCTG (5) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAAAGACGCT (3) 1.9 0.0019 Adult retinal TCAGTGCACA (2) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TCAGTGCACA (2) 3.8 0.0038 ONL TTTTTCAATA (6) 3.8 0.0038 ONL AAACAAGCTG (5) 1.9 0.0019 ONL TATGTGATAT (7) 1.9 0.0019 ONL TGCTTAAAAT 1.9 0.0019 ONL TGGGCACAGA (3) 1.9 0.0019