Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289248	Tceb1	transcription elongation factor B (SIII), polypeptide 1	1		67923
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	TCEB1[transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 132 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATTTTACCT (4) 8.2 0.0082 P8 Cb GC AAAATTGCAG 4.9 0.0049 P8 Cb GC TAATTATTGG 4.9 0.0049 P8 Cb GC TTGCCTGTAT 4.9 0.0049 P8 Cb GC GCTTTAATTA (7) 3.3 0.0033 P8 Cb GC TGAGGGGATC 3.3 0.0033 P8 Cb GC TTTATAACTT (3) 1.6 0.0016 Cb medulloblastoma TAATTATTGG 25.4 0.0254 Cb medulloblastoma AAAATTGCAG 11.6 0.0116 Cb medulloblastoma TGCCATCAAA (6) 4.6 0.0046 Cb medulloblastoma ACTTTATATG (3) 2.3 0.0023 Cb medulloblastoma TAATTATTTG (6) 2.3 0.0023 Cb medulloblastoma TATTTTACCT (4) 2.3 0.0023 Cb medulloblastoma TGAGGGGATC 2.3 0.0023 Cb medulloblastoma TTGCCTGTAT 2.3 0.0023 Cb medulloblastoma TTTATAACTT (3) 2.3 0.0023 P8 GC+1d culture TAATTATTGG 12.6 0.0126 P8 GC+1d culture TATTTTACCT (4) 5.7 0.0057 P8 GC+1d culture TTTATAACTT (3) 5.7 0.0057 P8 GC+1d culture AAAATTGCAG 4.6 0.0046 P8 GC+1d culture TTGCCTGTAT 1.1 0.0011 P8 GC+SHH+1d culture TAATTATTGG 4.7 0.0047 P8 GC+SHH+1d culture AAAATTGCAG 2.3 0.0023 P8 GC+SHH+1d culture TATTTTACCT (4) 2.3 0.0023 P8 GC+SHH+1d culture GCTTTAATTA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGCCATCAAA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTTATAACTT (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGGGTGCTTG (3) 3.5 0.0035 E15 cortex TTGCCTGTAT 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TAATTATTGG 36.4 0.0364 P1 cortex ACTTTATATG (3) 9.1 0.0091 P1 cortex TCTTGAAACA (2) 4.5 0.0045 P1 cortex TGCCATCAAA (6) 4.5 0.0045 P1 cortex TGGGTGCTTG (3) 4.5 0.0045 P1 cortex TTTATAACTT (3) 4.5 0.0045 Hypothalamus TAATTATTGG 110.5 0.1105 Hypothalamus TATTTTACCT (4) 5.4 0.0054 Hypothalamus AAAATTGCAG 3.6 0.0036 Hypothalamus ACTTTATATG (3) 3.6 0.0036 Hypothalamus GCCATCAGAA 3.6 0.0036 Hypothalamus TGAGGGGATC 3.6 0.0036 Hypothalamus TGCCATCAAA (6) 3.6 0.0036 Hypothalamus TAATTATTTG (6) 1.8 0.0018 Hypothalamus TGGGTGCTTG (3) 1.8 0.0018 Hypothalamus TTTATAACTT (3) 1.8 0.0018 E12.5 retina TAATTATTGG 5.6 0.0056 E12.5 retina AAAATTGCAG 3.8 0.0038 E12.5 retina TAATTATTTG (6) 1.9 0.0019 E12.5 retina TGAGGGGATC 1.9 0.0019 E14.5 retina TAATTATTGG 16.4 0.0164 E14.5 retina AAAATTGCAG 12.8 0.0128 E14.5 retina TATTTTACCT (4) 3.6 0.0036 E14.5 retina TGAGGGGATC 3.6 0.0036 E14.5 retina GCCATCAGAA 1.8 0.0018 E14.5 retina TAATTATTTG (6) 1.8 0.0018 E14.5 retina TCTTGAAACA (2) 1.8 0.0018 E14.5 retina TGCCATCAAA (6) 1.8 0.0018 E14.5 retina TTGCCTGTAT 1.8 0.0018 E16.5 retina TAATTATTGG 25.4 0.0254 E16.5 retina AAAATTGCAG 7.2 0.0072 E16.5 retina TATTTTACCT (4) 3.6 0.0036 E16.5 retina GCCATCAGAA 1.8 0.0018 E16.5 retina GCTTTAATTA (7) 1.8 0.0018 E16.5 retina TATTTTGTTA (3) 1.8 0.0018 E16.5 retina TGGGTGCTTG (3) 1.8 0.0018 E16.5 retina TTGCCTGTAT 1.8 0.0018 E16.5 retina TTTATAACTT (3) 1.8 0.0018 E18.5 retina TAATTATTGG 10.9 0.0109 E18.5 retina TATTTTACCT (4) 7.3 0.0073 E18.5 retina AAAATTGCAG 3.6 0.0036 E18.5 retina TAATTATTTG (6) 1.8 0.0018 E18.5 retina TATTTTGTTA (3) 1.8 0.0018 E18.5 retina TGCCATCAAA (6) 1.8 0.0018 E18.5 retina TTTATAACTT (3) 1.8 0.0018 P0.5 retina AAAATTGCAG 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TAATTATTGG 3.9 0.0039 P0.5 retina TATTTTGTTA (3) 3.9 0.0039 P2.5 retina TAATTATTGG 8.8 0.0088 P2.5 retina AAAATTGCAG 5.3 0.0053 P2.5 retina GCCATCAGAA 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TATTTTACCT (4) 1.8 0.0018 P2.5 retina TATTTTGTTA (3) 1.8 0.0018 P2.5 retina TTTATAACTT (3) 1.8 0.0018 P4.5 retina TAATTATTGG 11.9 0.0119 P4.5 retina AAAATTGCAG 7.9 0.0079 P4.5 retina TGAGGGGATC 5.9 0.0059 P4.5 retina TAATTATTTG (6) 4 0.004 P4.5 retina GCCATCAGAA 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TATTTTACCT (4) 2 0.002 P4.5 retina TATTTTGTTA (3) 2 0.002 P4.5 retina TGCCATCAAA (6) 2 0.002 P4.5 retina TGGGTGCTTG (3) 2 0.002 P4.5 retina TTGCCTGTAT 2 0.002 P4.5 retina TTTATAACTT (3) 2 0.002 P6.5 retina TAATTATTGG 6.7 0.0067 P6.5 retina AAAATTGCAG 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TTGCCTGTAT 3.3 0.0033 P6.5 retina TATTTTGTTA (3) 1.7 0.0017 P6.5 retina TGCCATCAAA (6) 1.7 0.0017 P6.5 retina TTTATAACTT (3) 1.7 0.0017 P10.5 crx- retina TAATTATTGG 13 0.013 P10.5 crx- retina AAAATTGCAG 3.7 0.0037 P10.5 crx- retina TGAGGGGATC 3.7 0.0037 P10.5 crx- retina TAATTATTTG (6) 1.9 0.0019 P10.5 crx- retina TATTTTACCT (4) 1.9 0.0019 P10.5 crx- retina TATTTTGTTA (3) 1.9 0.0019 P10.5 crx- retina TGCCATCAAA (6) 1.9 0.0019 P10.5 crx+ retina AAAATTGCAG 7.7 0.0077 P10.5 crx+ retina TAATTATTGG 3.8 0.0038 P10.5 crx+ retina TATTTTACCT (4) 3.8 0.0038 P10.5 crx+ retina TAATTATTTG (6) 1.9 0.0019 P10.5 crx+ retina TATTTTGTTA (3) 1.9 0.0019 P10.5 crx+ retina TGCCATCAAA (6) 1.9 0.0019 P10.5 crx+ retina TTTATAACTT (3) 1.9 0.0019 Adult retinal TAATTATTGG 7.4 0.0074 Adult retinal AAAATTGCAG 5.6 0.0056 Adult retinal TTGCCTGTAT 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL TAATTATTGG 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGCCATCAAA (6) 5.7 0.0057 ONL AAAATTGCAG 1.9 0.0019 ONL TATTTTACCT (4) 1.9 0.0019 ONL TATTTTGTTA (3) 1.9 0.0019 ONL TCTTGAAACA (2) 1.9 0.0019 ONL TGGGTGCTTG (3) 1.9 0.0019