Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.289329
Metap2
methionine aminopeptidase 2
10
56307
Mm.289329
A930035J23Rik
RIKEN cDNA A930035J23 gene
10
109310
Mm.289329
4930584B20Rik
RIKEN cDNA 4930584B20 gene
10
75865
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAATAAAA (
20
)
8.2
0.0082
P8 Cb GC
TAATTAACCA
(
3
)
4.9
0.0049
Cb medulloblastoma
AAAAATAAAA (
20
)
20.8
0.0208
Cb medulloblastoma
GGGGGGGGGG (
112
)
6.9
0.0069
P8 GC+1d culture
AAAAATAAAA (
20
)
11.4
0.0114
P8 GC+1d culture
TAATTAACCA
(
3
)
6.8
0.0068
P8 GC+1d culture
GGGGGGGGGG (
112
)
2.3
0.0023
P8 GC+1d culture
AAATAAAGCA (
11
)
1.1
0.0011
P8 GC+1d culture
TTGCAAATTA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TAATTAACCA
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GGGGGGGGGG (
112
)
7
0.007
P8 GC+SHH+1d culture
AAAAATAAAA (
20
)
5.9
0.0059
P8 GC+SHH+1d culture
AAATAAAGCA (
11
)
4.7
0.0047
P8 GC+SHH+1d culture
TTGCAAATTA
(
3
)
1.2
0.0012
3T3 fibroblasts
GCGGGCGTGG
(
3
)
31.5
0.0315
3T3 fibroblasts
GGGGGGGGGG (
112
)
3.5
0.0035
E15 cortex
GCGGGCGTGG
(
3
)
14.8
0.0148
E15 cortex
GGGGGGGGGG (
112
)
4.9
0.0049
E15 cortex
TAATTAACCA
(
3
)
4.9
0.0049
P1 cortex
AAAAATAAAA (
20
)
4.5
0.0045
P1 cortex
GCGGGCGTGG
(
3
)
4.5
0.0045
Hypothalamus
AAAAATAAAA (
20
)
14.5
0.0145
Hypothalamus
AAATAAAGCA (
11
)
1.8
0.0018
Hypothalamus
GGGGGGGGGG (
112
)
1.8
0.0018
E12.5 retina
TAATTAACCA
(
3
)
3.8
0.0038
E12.5 retina
AAAAATAAAA (
20
)
1.9
0.0019
E12.5 retina
AAATAAAGCA (
11
)
1.9
0.0019
E14.5 retina
AAAAATAAAA (
20
)
16.4
0.0164
E14.5 retina
TAATTAACCA
(
3
)
1.8
0.0018
E16.5 retina
AAAAATAAAA (
20
)
9.1
0.0091
E16.5 retina
AAATAAAGCA (
11
)
3.6
0.0036
E16.5 retina
ATTACGCCAA (
233
)
1.8
0.0018
E16.5 retina
GCGGGCGTGG
(
3
)
1.8
0.0018
E16.5 retina
TAATTAACCA
(
3
)
1.8
0.0018
E16.5 retina
TTGCAAATTA
(
3
)
1.8
0.0018
E18.5 retina
AAAAATAAAA (
20
)
7.3
0.0073
E18.5 retina
AAATAAAGCA (
11
)
3.6
0.0036
E18.5 retina
TAATTAACCA
(
3
)
1.8
0.0018
P0.5 retina
TAATTAACCA
(
3
)
5.9
0.0059
P0.5 retina
AAAAATAAAA (
20
)
3.9
0.0039
P0.5 retina
AAATAAAGCA (
11
)
2
0.002
P0.5 retina
ATTACGCCAA (
233
)
2
0.002
P2.5 retina
GGGGGGGGGG (
112
)
7
0.007
P2.5 retina
TAATTAACCA
(
3
)
3.5
0.0035
P2.5 retina
AAAAATAAAA (
20
)
1.8
0.0018
P2.5 retina
AAATAAAGCA (
11
)
1.8
0.0018
P2.5 retina
TTGCAAATTA
(
3
)
1.8
0.0018
P4.5 retina
GGGGGGGGGG (
112
)
9.9
0.0099
P4.5 retina
AAAAATAAAA (
20
)
5.9
0.0059
P4.5 retina
AAATAAAGCA (
11
)
2
0.002
P6.5 retina
AAAAATAAAA (
20
)
13.3
0.0133
P6.5 retina
GGGGGGGGGG (
112
)
3.3
0.0033
P6.5 retina
TAATTAACCA
(
3
)
3.3
0.0033
P6.5 retina
AAATAAAGCA (
11
)
1.7
0.0017
P10.5 crx- retina
AAAAATAAAA (
20
)
1.9
0.0019
P10.5 crx- retina
AAATAAAGCA (
11
)
1.9
0.0019
P10.5 crx- retina
TAATTAACCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGGGGGGGGG (
112
)
9.6
0.0096
P10.5 crx+ retina
AAAAATAAAA (
20
)
3.8
0.0038
P10.5 crx+ retina
TAATTAACCA
(
3
)
1.9
0.0019
Adult retinal
ATTACGCCAA (
233
)
3.7
0.0037
Adult retinal
GGGGGGGGGG (
112
)
3.7
0.0037
Adult retinal
AAAAATAAAA (
20
)
1.9
0.0019
Adult retinal
TTGCAAATTA
(
3
)
1.9
0.0019
ONL
GGGGGGGGGG (
112
)
1.9
0.0019
ONL
TAATTAACCA
(
3
)
1.9
0.0019
