Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28955
4930570C03Rik
RIKEN cDNA 4930570C03 gene
15
67739
Human Homolog
FLJ20489[hypothetical protein FLJ20489]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTGTAAA (
7
)
3.3
0.0033
P8 Cb GC
GAGGGTAAAG
(
7
)
1.6
0.0016
P8 Cb GC
GGCCCAAGGC
(
8
)
1.6
0.0016
Cb medulloblastoma
GGCCCAAGGC
(
8
)
9.2
0.0092
Cb medulloblastoma
GAGGGTAAAG
(
7
)
2.3
0.0023
P8 GC+1d culture
TTTTTGTAAA (
7
)
5.7
0.0057
P8 GC+1d culture
GGCCCAAGGC
(
8
)
3.4
0.0034
P8 GC+1d culture
TATTAGCCAA
3.4
0.0034
P8 GC+SHH+1d culture
GGCCCAAGGC
(
8
)
7
0.007
3T3 fibroblasts
GGCCCAAGGC
(
8
)
17.5
0.0175
P1 cortex
GGCCCAAGGC
(
8
)
9.1
0.0091
P1 cortex
TATTAGCCAA
4.5
0.0045
P1 cortex
TTTTTGTAAA (
7
)
4.5
0.0045
Hypothalamus
GGCCCAAGGC
(
8
)
12.7
0.0127
Hypothalamus
TTTTTGTAAA (
7
)
1.8
0.0018
E12.5 retina
TTTTTGTAAA (
7
)
11.3
0.0113
E12.5 retina
GGCCCAAGGC
(
8
)
1.9
0.0019
E12.5 retina
TATTAGCCAA
1.9
0.0019
E14.5 retina
TTTTTGTAAA (
7
)
7.3
0.0073
E16.5 retina
GGCCCAAGGC
(
8
)
3.6
0.0036
E16.5 retina
GAGGGTAAAG
(
7
)
1.8
0.0018
E16.5 retina
TTTTTGTAAA (
7
)
1.8
0.0018
E18.5 retina
TTTTTGTAAA (
7
)
3.6
0.0036
E18.5 retina
GGCCCAAGGC
(
8
)
1.8
0.0018
P0.5 retina
GGCCCAAGGC
(
8
)
2
0.002
P0.5 retina
TATTAGCCAA
2
0.002
P0.5 retina
TTTTTGTAAA (
7
)
2
0.002
P2.5 retina
TTTTTGTAAA (
7
)
7
0.007
P2.5 retina
GAGGGTAAAG
(
7
)
1.8
0.0018
P2.5 retina
GGCCCAAGGC
(
8
)
1.8
0.0018
P2.5 retina
TATTAGCCAA
1.8
0.0018
P4.5 retina
TTTTTGTAAA (
7
)
9.9
0.0099
P4.5 retina
GGCCCAAGGC
(
8
)
4
0.004
P6.5 retina
GGCCCAAGGC
(
8
)
8.3
0.0083
P6.5 retina
CTGCCCTGCA (
3
)
3.3
0.0033
P6.5 retina
TATTAGCCAA
3.3
0.0033
P10.5 crx- retina
GGCCCAAGGC
(
8
)
16.7
0.0167
P10.5 crx- retina
TTTTTGTAAA (
7
)
9.3
0.0093
P10.5 crx- retina
TATTAGCCAA
5.6
0.0056
P10.5 crx- retina
GAGGGTAAAG
(
7
)
1.9
0.0019
P10.5 crx+ retina
GGCCCAAGGC
(
8
)
9.6
0.0096
P10.5 crx+ retina
TTTTTGTAAA (
7
)
3.8
0.0038
P10.5 crx+ retina
TATTAGCCAA
1.9
0.0019
Adult retinal
GGCCCAAGGC
(
8
)
9.3
0.0093
Adult retinal
CTGCCCTGCA (
3
)
1.9
0.0019
ONL
GGCCCAAGGC
(
8
)
3.8
0.0038
ONL
TTTTTGTAAA (
7
)
3.8
0.0038
