Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289583	Dncli2	dynein, cytoplasmic, light intermediate polypeptide 2	8		234663
Human Homolog	DNCLI2[dynein, cytoplasmic, light intermediate polypeptide 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAGAAATA (4) 13.1 0.0131 P8 Cb GC TGGAACCTTG (2) 8.2 0.0082 P8 Cb GC ACCAAACTCC (7) 1.6 0.0016 P8 Cb GC ACTTTAATGT (3) 1.6 0.0016 P8 Cb GC TGCTCAGTAG 1.6 0.0016 Cb medulloblastoma AAAAGAAATA (4) 41.6 0.0416 Cb medulloblastoma TGGAACCTTG (2) 16.2 0.0162 Cb medulloblastoma ACCAAACTCC (7) 4.6 0.0046 Cb medulloblastoma AGGGCTGTGA (2) 4.6 0.0046 Cb medulloblastoma CCAAGGCTGC (2) 4.6 0.0046 Cb medulloblastoma GAGTCTGGCT (2) 2.3 0.0023 Cb medulloblastoma TTGAACCTGC 2.3 0.0023 P8 GC+1d culture AAAAGAAATA (4) 11.4 0.0114 P8 GC+1d culture TGGAACCTTG (2) 9.1 0.0091 P8 GC+1d culture ACAAGGCTGC (4) 4.6 0.0046 P8 GC+1d culture ACCAAACTCC (7) 4.6 0.0046 P8 GC+1d culture ACTGCATACT 2.3 0.0023 P8 GC+1d culture TATGTAACAA (2) 2.3 0.0023 P8 GC+1d culture AGGGCTGTGA (2) 1.1 0.0011 P8 GC+1d culture GAGTCTGGCT (2) 1.1 0.0011 P8 GC+1d culture TTGGCAATGT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAGAAATA (4) 10.5 0.0105 P8 GC+SHH+1d culture TGGAACCTTG (2) 4.7 0.0047 P8 GC+SHH+1d culture ACCAAACTCC (7) 3.5 0.0035 P8 GC+SHH+1d culture TGGATGTCAC (3) 2.3 0.0023 P8 GC+SHH+1d culture ACAAGGCTGC (4) 1.2 0.0012 P8 GC+SHH+1d culture ACTGCATACT 1.2 0.0012 P8 GC+SHH+1d culture ACTTTAATGT (3) 1.2 0.0012 P8 GC+SHH+1d culture AGGGCTGTGA (2) 1.2 0.0012 E15 cortex TGGAACCTTG (2) 19.8 0.0198 E15 cortex ACCAAACTCC (7) 4.9 0.0049 E15 cortex TGGGTCCCGG (2) 4.9 0.0049 P1 cortex TGGAACCTTG (2) 13.6 0.0136 P1 cortex AAAAGAAATA (4) 4.5 0.0045 P1 cortex ACCAAACTCC (7) 4.5 0.0045 P1 cortex ACTGCATACT 4.5 0.0045 Hypothalamus AAAAGAAATA (4) 25.4 0.0254 Hypothalamus TGGAACCTTG (2) 10.9 0.0109 Hypothalamus ACTGCATACT 3.6 0.0036 Hypothalamus ACAAGGCTGC (4) 1.8 0.0018 Hypothalamus ACCAAACTCC (7) 1.8 0.0018 Hypothalamus CCAAGGCTGC (2) 1.8 0.0018 E12.5 retina TGGAACCTTG (2) 11.3 0.0113 E12.5 retina AAAAGAAATA (4) 5.6 0.0056 E12.5 retina ACAAGGCTGC (4) 1.9 0.0019 E12.5 retina ACCAAACTCC (7) 1.9 0.0019 E12.5 retina AGGGCTGTGA (2) 1.9 0.0019 E12.5 retina TATGTAACAA (2) 1.9 0.0019 E12.5 retina TTGGCAATGT (2) 1.9 0.0019 E14.5 retina AAAAGAAATA (4) 25.5 0.0255 E14.5 retina ACCAAACTCC (7) 5.5 0.0055 E14.5 retina TGGAACCTTG (2) 5.5 0.0055 E14.5 retina ACAAGGCTGC (4) 3.6 0.0036 E16.5 retina AAAAGAAATA (4) 23.5 0.0235 E16.5 retina TGGAACCTTG (2) 9.1 0.0091 E16.5 retina ACAAGGCTGC (4) 3.6 0.0036 E16.5 retina ACCAAACTCC (7) 1.8 0.0018 E16.5 retina ACTGCATACT 1.8 0.0018 E16.5 retina AGGGCTGTGA (2) 1.8 0.0018 E18.5 retina AAAAGAAATA (4) 27.3 0.0273 E18.5 retina TGGAACCTTG (2) 7.3 0.0073 E18.5 retina ACCAAACTCC (7) 1.8 0.0018 E18.5 retina TGGATGTCAC (3) 1.8 0.0018 E18.5 retina TGGGTCCCGG (2) 1.8 0.0018 P0.5 retina TGGAACCTTG (2) 5.9 0.0059 P0.5 retina TTGGCAATGT (2) 5.9 0.0059 P0.5 retina GAGTCTGGCT (2) 3.9 0.0039 P0.5 retina AAAAGAAATA (4) 2 0.002 P2.5 retina AAAAGAAATA (4) 14.1 0.0141 P2.5 retina TGGAACCTTG (2) 10.6 0.0106 P2.5 retina ACAAGGCTGC (4) 1.8 0.0018 P2.5 retina ACCAAACTCC (7) 1.8 0.0018 P2.5 retina ACTTTAATGT (3) 1.8 0.0018 P4.5 retina TGGAACCTTG (2) 15.9 0.0159 P4.5 retina AAAAGAAATA (4) 13.9 0.0139 P4.5 retina ACCAAACTCC (7) 5.9 0.0059 P4.5 retina TATGTAACAA (2) 2 0.002 P4.5 retina TGCTCAGTAG 2 0.002 P4.5 retina TTGGCAATGT (2) 2 0.002 P6.5 retina AAAAGAAATA (4) 30 0.03 P6.5 retina TGGAACCTTG (2) 6.7 0.0067 P6.5 retina ACAAGGCTGC (4) 3.3 0.0033 P6.5 retina ACCAAACTCC (7) 3.3 0.0033 P6.5 retina GAGTCTGGCT (2) 1.7 0.0017 P10.5 crx- retina TGGAACCTTG (2) 11.1 0.0111 P10.5 crx- retina AAAAGAAATA (4) 3.7 0.0037 P10.5 crx- retina ACTGCATACT 1.9 0.0019 P10.5 crx- retina TTGAACCTGC 1.9 0.0019 P10.5 crx- retina TTGGCAATGT (2) 1.9 0.0019 P10.5 crx+ retina AAAAGAAATA (4) 5.8 0.0058 P10.5 crx+ retina ACCAAACTCC (7) 1.9 0.0019 P10.5 crx+ retina ACTGCATACT 1.9 0.0019 P10.5 crx+ retina CCAAGGCTGC (2) 1.9 0.0019 Adult retinal ACCAAACTCC (7) 5.6 0.0056 Adult retinal TGGAACCTTG (2) 5.6 0.0056 Adult retinal TGCTCAGTAG 3.7 0.0037 Adult retinal ACAAGGCTGC (4) 1.9 0.0019 Adult retinal TTGGCAATGT (2) 1.9 0.0019 ONL AAAAGAAATA (4) 11.5 0.0115 ONL ACCAAACTCC (7) 1.9 0.0019 ONL TGGAACCTTG (2) 1.9 0.0019 ONL TTGAACCTGC 1.9 0.0019