Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.28979
BC022641
cDNA sequence BC022641
8
234699
Human Homolog
RCD-8[autoantigen]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 77 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCTTACA (
19
)
11.4
0.0114
P8 Cb GC
TTCCTTTTTA
(
6
)
4.9
0.0049
P8 Cb GC
GAGCCCTTCC (
5
)
1.6
0.0016
P8 Cb GC
TATGTGTGTG (
19
)
1.6
0.0016
Cb medulloblastoma
GTGGCTTACA (
19
)
23.1
0.0231
Cb medulloblastoma
TTCCTTTTTA
(
6
)
4.6
0.0046
Cb medulloblastoma
GAGCCCTTCC (
5
)
2.3
0.0023
P8 GC+1d culture
GTGGCTTACA (
19
)
30.8
0.0308
P8 GC+1d culture
TATGTGTGTG (
19
)
5.7
0.0057
P8 GC+1d culture
TTCCTTTTTA
(
6
)
3.4
0.0034
P8 GC+1d culture
GAGCCCTTCC (
5
)
2.3
0.0023
P8 GC+1d culture
AGAGCATTAA (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGCTTACA (
19
)
36.3
0.0363
P8 GC+SHH+1d culture
TATGTGTGTG (
19
)
8.2
0.0082
P8 GC+SHH+1d culture
AGAGCATTAA (
8
)
1.2
0.0012
3T3 fibroblasts
GTGGCTTACA (
19
)
35
0.035
3T3 fibroblasts
TATGTGTGTG (
19
)
3.5
0.0035
E15 cortex
GTGGCTTACA (
19
)
19.8
0.0198
E15 cortex
TTCCTTTTTA
(
6
)
4.9
0.0049
P1 cortex
GTGGCTTACA (
19
)
22.7
0.0227
P1 cortex
TATGTGTGTG (
19
)
9.1
0.0091
Hypothalamus
GTGGCTTACA (
19
)
23.5
0.0235
Hypothalamus
ATGGGAGGCT
(
4
)
1.8
0.0018
Hypothalamus
GAAAATTCAA (
2
)
1.8
0.0018
Hypothalamus
TTCCTTTTTA
(
6
)
1.8
0.0018
E12.5 retina
GTGGCTTACA (
19
)
43.2
0.0432
E12.5 retina
GAGCCCTTCC (
5
)
7.5
0.0075
E12.5 retina
TTCCTTTTTA
(
6
)
5.6
0.0056
E12.5 retina
AGAGCATTAA (
8
)
3.8
0.0038
E12.5 retina
CAGCAGGGCA
1.9
0.0019
E12.5 retina
TATGTGTGTG (
19
)
1.9
0.0019
E14.5 retina
GTGGCTTACA (
19
)
51
0.051
E14.5 retina
ATGGGAGGCT
(
4
)
3.6
0.0036
E14.5 retina
GAGCCCTTCC (
5
)
3.6
0.0036
E14.5 retina
GAAAATTCAA (
2
)
1.8
0.0018
E14.5 retina
TTCCTTTTTA
(
6
)
1.8
0.0018
E16.5 retina
GTGGCTTACA (
19
)
50.7
0.0507
E16.5 retina
GAGCCCTTCC (
5
)
5.4
0.0054
E16.5 retina
ATGGGAGGCC
1.8
0.0018
E16.5 retina
TTCCTTTTTA
(
6
)
1.8
0.0018
E18.5 retina
GTGGCTTACA (
19
)
40
0.04
E18.5 retina
AGAGCATTAA (
8
)
3.6
0.0036
E18.5 retina
GAGCCCTTCC (
5
)
3.6
0.0036
E18.5 retina
TTCCTTTTTA
(
6
)
1.8
0.0018
P0.5 retina
GTGGCTTACA (
19
)
45.1
0.0451
P0.5 retina
TATGTGTGTG (
19
)
3.9
0.0039
P0.5 retina
TTCCTTTTTA
(
6
)
3.9
0.0039
P0.5 retina
GAGCCCTTCC (
5
)
2
0.002
P2.5 retina
GTGGCTTACA (
19
)
21.1
0.0211
P2.5 retina
GAGCCCTTCC (
5
)
12.3
0.0123
P2.5 retina
TTCCTTTTTA
(
6
)
7
0.007
P2.5 retina
ATGGGAGGCC
1.8
0.0018
P2.5 retina
TATGTGTGTG (
19
)
1.8
0.0018
P4.5 retina
GTGGCTTACA (
19
)
25.8
0.0258
P4.5 retina
TTCCTTTTTA
(
6
)
5.9
0.0059
P4.5 retina
GAGCCCTTCC (
5
)
2
0.002
P6.5 retina
GTGGCTTACA (
19
)
35
0.035
P6.5 retina
GAGCCCTTCC (
5
)
5
0.005
P6.5 retina
TTCCTTTTTA
(
6
)
5
0.005
P10.5 crx- retina
GTGGCTTACA (
19
)
24.2
0.0242
P10.5 crx- retina
GAGCCCTTCC (
5
)
1.9
0.0019
P10.5 crx- retina
TATGTGTGTG (
19
)
1.9
0.0019
P10.5 crx- retina
TTCCTTTTTA
(
6
)
1.9
0.0019
P10.5 crx+ retina
GTGGCTTACA (
19
)
32.7
0.0327
P10.5 crx+ retina
ATGGGAGGCC
1.9
0.0019
P10.5 crx+ retina
GAAAATTCAA (
2
)
1.9
0.0019
P10.5 crx+ retina
TATGTGTGTG (
19
)
1.9
0.0019
P10.5 crx+ retina
TTCCTTTTTA
(
6
)
1.9
0.0019
Adult retinal
GTGGCTTACA (
19
)
18.5
0.0185
Adult retinal
TTCCTTTTTA
(
6
)
7.4
0.0074
Adult retinal
ATGGGAGGCC
1.9
0.0019
Adult retinal
GAGCCCTTCC (
5
)
1.9
0.0019
Adult retinal
TATGTGTGTG (
19
)
1.9
0.0019
ONL
GTGGCTTACA (
19
)
30.6
0.0306
ONL
TTCCTTTTTA
(
6
)
9.6
0.0096
ONL
CAGCAGGGCA
3.8
0.0038
ONL
GAGCCCTTCC (
5
)
1.9
0.0019
