Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28995	Jarid1b	jumonji, AT rich interactive domain 1B (Rbp2 like)	1	1 72.0 cM	75605
Human Homolog	JARID1B[Jumonji, AT rich interactive domain 1B (RBP2-like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAATTCAGGA (2) 3.3 0.0033 P8 Cb GC CCAGTGATGG (4) 1.6 0.0016 Cb medulloblastoma GAAGCAGTGT (4) 6.9 0.0069 Cb medulloblastoma ATCAGTGTGA (3) 4.6 0.0046 Cb medulloblastoma TAATTCAGGA (2) 2.3 0.0023 P8 GC+1d culture CCAGTGATGG (4) 3.4 0.0034 P8 GC+1d culture TAATTCAGGA (2) 3.4 0.0034 P8 GC+1d culture ATCAGTGTGA (3) 1.1 0.0011 P8 GC+1d culture GAAGCAGTGT (4) 1.1 0.0011 P8 GC+1d culture TACAGAAAGC 1.1 0.0011 P8 GC+1d culture TTCTTTTTCA (5) 1.1 0.0011 P8 GC+SHH+1d culture ATCAGTGTGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TAATTCAGGA (2) 3.5 0.0035 P8 GC+SHH+1d culture CCAGTGATGG (4) 2.3 0.0023 P8 GC+SHH+1d culture TTCTTTTTCA (5) 1.2 0.0012 3T3 fibroblasts TTCTTTTTCA (5) 3.5 0.0035 E15 cortex CGGACCCCCC 9.9 0.0099 E15 cortex AGAGCAGAGG (7) 4.9 0.0049 E15 cortex TAATTCAGGA (2) 4.9 0.0049 E15 cortex TACAGAAAGC 4.9 0.0049 P1 cortex TAATTCAGGA (2) 9.1 0.0091 P1 cortex GGATATTTTT (2) 4.5 0.0045 P1 cortex TACAGAAAGC 4.5 0.0045 P1 cortex TTCTTTTTCA (5) 4.5 0.0045 Hypothalamus GAAGCAGTGT (4) 3.6 0.0036 Hypothalamus AGAGCAGAGG (7) 1.8 0.0018 Hypothalamus ATCAGTGTGA (3) 1.8 0.0018 Hypothalamus CCAGTGATGG (4) 1.8 0.0018 E12.5 retina TAATTCAGGA (2) 3.8 0.0038 E12.5 retina TACAGAAAGC 1.9 0.0019 E14.5 retina ATCAGTGTGA (3) 7.3 0.0073 E14.5 retina CCAGTGATGG (4) 1.8 0.0018 E14.5 retina GCCAGTTCCA (3) 1.8 0.0018 E16.5 retina ATCAGTGTGA (3) 5.4 0.0054 E16.5 retina TAATTCAGGA (2) 5.4 0.0054 E16.5 retina CCCCACTAAT 1.8 0.0018 E18.5 retina ATCAGTGTGA (3) 3.6 0.0036 E18.5 retina CCAGTGATGG (4) 1.8 0.0018 E18.5 retina GAAGCAGTGT (4) 1.8 0.0018 P0.5 retina ATCAGTGTGA (3) 5.9 0.0059 P0.5 retina CCAGTGATGG (4) 5.9 0.0059 P2.5 retina ATCAGTGTGA (3) 7 0.007 P2.5 retina TAATTCAGGA (2) 3.5 0.0035 P2.5 retina TACAGAAAGC 3.5 0.0035 P4.5 retina CCAGTGATGG (4) 5.9 0.0059 P4.5 retina TAATTCAGGA (2) 4 0.004 P4.5 retina ATCAGTGTGA (3) 2 0.002 P4.5 retina CCCCACTAAT 2 0.002 P6.5 retina CCAGTGATGG (4) 5 0.005 P6.5 retina ATCAGTGTGA (3) 3.3 0.0033 P6.5 retina CCCCACTAAT 1.7 0.0017 P6.5 retina TACAGAAAGC 1.7 0.0017 P10.5 crx- retina GAAGCAGTGT (4) 1.9 0.0019 P10.5 crx- retina TAATTCAGGA (2) 1.9 0.0019 P10.5 crx+ retina AAGTGCCTGT (4) 3.8 0.0038 P10.5 crx+ retina ATCAGTGTGA (3) 3.8 0.0038 P10.5 crx+ retina TACAGAAAGC 3.8 0.0038 P10.5 crx+ retina AGAGCAGAGG (7) 1.9 0.0019 Adult retinal GGATATTTTT (2) 3.7 0.0037 Adult retinal AAGTGCCTGT (4) 1.9 0.0019 Adult retinal GCCAGTTCCA (3) 1.9 0.0019 Adult retinal TTCTTTTTCA (5) 1.9 0.0019 ONL CCCCACTAAT 1.9 0.0019 ONL CGGACCCCCC 1.9 0.0019 ONL GAAGCAGTGT (4) 1.9 0.0019 ONL GCCAGTTCCA (3) 1.9 0.0019 ONL GGATATTTTT (2) 1.9 0.0019 ONL TAATTCAGGA (2) 1.9 0.0019 ONL TACAGAAAGC 1.9 0.0019