Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.289992	Eif3s6	eukaryotic translation initiation factor 3, subunit 6	15	15 17.1 cM	16341
Gene Ontology	cell growth and/or maintenance | eukaryotic translation initiation factor 3 complex | protein biosynthesis | regulation of translational initiation | translation initiation factor activity
Human Homolog	EIF3S6[eukaryotic translation initiation factor 3, subunit 6 48kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTACAA (3) 26.1 0.0261 P8 Cb GC TTTGCTACGA 4.9 0.0049 P8 Cb GC AATATCGAAA (3) 3.3 0.0033 P8 Cb GC GCTCATTCAT (2) 1.6 0.0016 P8 Cb GC GGCTAGATTT 1.6 0.0016 Cb medulloblastoma TTTGCTACAA (3) 20.8 0.0208 Cb medulloblastoma GGCTAGATTT 4.6 0.0046 Cb medulloblastoma ACCTAGTTTA 2.3 0.0023 Cb medulloblastoma CTTTTAAAAA (10) 2.3 0.0023 Cb medulloblastoma TTTGCTACGA 2.3 0.0023 P8 GC+1d culture TTTGCTACAA (3) 44.5 0.0445 P8 GC+1d culture CTTTTAAAAA (10) 4.6 0.0046 P8 GC+1d culture ACCTAGTTTA 1.1 0.0011 P8 GC+1d culture GCTCATTCAT (2) 1.1 0.0011 P8 GC+1d culture GGCTAGATTT 1.1 0.0011 P8 GC+1d culture TGATGCATTT (4) 1.1 0.0011 P8 GC+1d culture TTAATTGCTT 1.1 0.0011 P8 GC+SHH+1d culture TTTGCTACAA (3) 44.5 0.0445 P8 GC+SHH+1d culture CTTTTAAAAA (10) 4.7 0.0047 P8 GC+SHH+1d culture GCTCATTCAT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCTAGATTT 2.3 0.0023 P8 GC+SHH+1d culture ACCTAGTTTA 1.2 0.0012 P8 GC+SHH+1d culture TTAATTGCTT 1.2 0.0012 3T3 fibroblasts GGCTAGATTT 17.5 0.0175 3T3 fibroblasts AATATCGAAA (3) 3.5 0.0035 3T3 fibroblasts ACCTAGTTTA 3.5 0.0035 3T3 fibroblasts TTTGCTACAA (3) 3.5 0.0035 E15 cortex AATATCGAAA (3) 9.9 0.0099 E15 cortex GGGTTTTGGG (9) 9.9 0.0099 E15 cortex TTTGCTACAA (3) 9.9 0.0099 E15 cortex CTTTTAAAAA (10) 4.9 0.0049 P1 cortex TTTGCTACAA (3) 18.2 0.0182 P1 cortex ACCTAGTTTA 9.1 0.0091 P1 cortex GGCTAGATTT 9.1 0.0091 Hypothalamus TTTGCTACAA (3) 21.7 0.0217 Hypothalamus GGCTAGATTT 16.3 0.0163 Hypothalamus AATATCGAAA (3) 1.8 0.0018 Hypothalamus CTTTTAAAAA (10) 1.8 0.0018 E12.5 retina TTTGCTACAA (3) 67.6 0.0676 E12.5 retina GGCTAGATTT 7.5 0.0075 E12.5 retina CTTTTAAAAA (10) 3.8 0.0038 E12.5 retina GCTCATTCAT (2) 3.8 0.0038 E12.5 retina AATATCGAAA (3) 1.9 0.0019 E12.5 retina TTAATTGCTT 1.9 0.0019 E14.5 retina TTTGCTACAA (3) 52.8 0.0528 E14.5 retina CTTTTAAAAA (10) 7.3 0.0073 E14.5 retina GGCTAGATTT 5.5 0.0055 E14.5 retina ACCTAGTTTA 1.8 0.0018 E16.5 retina TTTGCTACAA (3) 58 0.058 E16.5 retina TTAATTGCTT 9.1 0.0091 E16.5 retina CTTTTAAAAA (10) 3.6 0.0036 E16.5 retina TGGTAATGGG (3) 3.6 0.0036 E16.5 retina ACCTAGTTTA 1.8 0.0018 E16.5 retina GGCTAGATTT 1.8 0.0018 E18.5 retina TTTGCTACAA (3) 45.5 0.0455 E18.5 retina CTTTTAAAAA (10) 5.5 0.0055 E18.5 retina TTAATTGCTT 1.8 0.0018 P0.5 retina TTTGCTACAA (3) 21.6 0.0216 P0.5 retina GGCTAGATTT 2 0.002 P0.5 retina TGATGCATTT (4) 2 0.002 P0.5 retina TTTGTTACAA (2) 2 0.002 P2.5 retina TTTGCTACAA (3) 33.4 0.0334 P2.5 retina CTTTTAAAAA (10) 7 0.007 P2.5 retina AATATCGAAA (3) 3.5 0.0035 P4.5 retina TTTGCTACAA (3) 39.6 0.0396 P4.5 retina CTTTTAAAAA (10) 5.9 0.0059 P4.5 retina GGCTAGATTT 2 0.002 P4.5 retina TGATGCATTT (4) 2 0.002 P4.5 retina TTAATTGCTT 2 0.002 P6.5 retina TTTGCTACAA (3) 33.3 0.0333 P6.5 retina CTTTTAAAAA (10) 6.7 0.0067 P6.5 retina TGATGCATTT (4) 3.3 0.0033 P6.5 retina AATATCGAAA (3) 1.7 0.0017 P6.5 retina ACCTAGTTTA 1.7 0.0017 P6.5 retina GGCTAGATTT 1.7 0.0017 P6.5 retina GGGTTTTGGG (9) 1.7 0.0017 P10.5 crx- retina TTTGCTACAA (3) 9.3 0.0093 P10.5 crx- retina ACCTAGTTTA 1.9 0.0019 P10.5 crx- retina CTTTTAAAAA (10) 1.9 0.0019 P10.5 crx- retina GCTCATTCAT (2) 1.9 0.0019 P10.5 crx+ retina TTTGCTACAA (3) 23.1 0.0231 P10.5 crx+ retina TTTGTTACAA (2) 3.8 0.0038 P10.5 crx+ retina CTTTTAAAAA (10) 1.9 0.0019 P10.5 crx+ retina GCTCATTCAT (2) 1.9 0.0019 P10.5 crx+ retina TTAATTGCTT 1.9 0.0019 Adult retinal TTTGCTACAA (3) 9.3 0.0093 Adult retinal GGCTAGATTT 3.7 0.0037 Adult retinal TGATGCATTT (4) 1.9 0.0019 ONL TTTGCTACAA (3) 13.4 0.0134 ONL GGCTAGATTT 5.7 0.0057 ONL CTTTTAAAAA (10) 1.9 0.0019 ONL TGGTAATGGG (3) 1.9 0.0019