Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290003	A830009F23Rik	RIKEN cDNA A830009F23 gene	14		105424
Mm.290003	Myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	14	14 20.0 cM	17888
Gene Ontology	actin binding | ATP binding | calmodulin binding | cytoskeleton | cytoskeleton organization and biogenesis | motor activity | muscle development | myosin | striated muscle contraction | striated muscle thick filament | visceral muscle development
Human Homolog	MYH6[myosin, heavy polypeptide 6, cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCAGTTTGT (6) 8.2 0.0082 P8 Cb GC CTGGGCCCAG (8) 8.2 0.0082 P8 Cb GC CCCTTCACTG (2) 3.3 0.0033 Cb medulloblastoma CTGGGCCCAG (8) 9.2 0.0092 Cb medulloblastoma CCCTTCACTG (2) 2.3 0.0023 Cb medulloblastoma CGCTCCAGGT (2) 2.3 0.0023 P8 GC+1d culture CTGGGCCCAG (8) 19.4 0.0194 P8 GC+1d culture CCCTTCACTG (2) 10.3 0.0103 P8 GC+1d culture ATCAGTTTGT (6) 5.7 0.0057 P8 GC+1d culture CTTTTCCTTT (7) 4.6 0.0046 P8 GC+1d culture AAGCTGTTGA (10) 1.1 0.0011 P8 GC+SHH+1d culture CTGGGCCCAG (8) 11.7 0.0117 P8 GC+SHH+1d culture CCCTTCACTG (2) 5.9 0.0059 P8 GC+SHH+1d culture ATCAGTTTGT (6) 4.7 0.0047 P8 GC+SHH+1d culture CTTTTCCTTT (7) 3.5 0.0035 P8 GC+SHH+1d culture AAGCTGTTGA (10) 1.2 0.0012 P8 GC+SHH+1d culture ATGACACAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGGATGCAG (6) 1.2 0.0012 3T3 fibroblasts CTGGGCCCAG (8) 7 0.007 3T3 fibroblasts ATGGCTGAGG (4) 3.5 0.0035 E15 cortex ATCAGTTTGT (6) 9.9 0.0099 E15 cortex CCCTTCACTG (2) 9.9 0.0099 E15 cortex ATGCTGAGGA (4) 4.9 0.0049 E15 cortex GAGGATGCAG (6) 4.9 0.0049 P1 cortex CTGGGCCCAG (8) 13.6 0.0136 P1 cortex ATCAGTTTGT (6) 4.5 0.0045 P1 cortex CTTTTCCTTT (7) 4.5 0.0045 Hypothalamus CTGGGCCCAG (8) 25.4 0.0254 Hypothalamus CAACAGAGAA (4) 1.8 0.0018 Hypothalamus CTTTTCCTTT (7) 1.8 0.0018 E12.5 retina ATCAGTTTGT (6) 13.1 0.0131 E12.5 retina ATGACACAAA (5) 1.9 0.0019 E12.5 retina ATGGCTGAGG (4) 1.9 0.0019 E12.5 retina CCCTTCACTG (2) 1.9 0.0019 E12.5 retina CTGGGCCCAG (8) 1.9 0.0019 E12.5 retina CTTTTCCTTT (7) 1.9 0.0019 E12.5 retina TGTGTGCCTA (2) 1.9 0.0019 E14.5 retina ATCAGTTTGT (6) 7.3 0.0073 E14.5 retina CCCTTCACTG (2) 7.3 0.0073 E14.5 retina CTGGGCCCAG (8) 7.3 0.0073 E16.5 retina CCCTTCACTG (2) 12.7 0.0127 E16.5 retina CTGGGCCCAG (8) 3.6 0.0036 E16.5 retina ATCAGTTTGT (6) 1.8 0.0018 E16.5 retina GAGCAGATCA (4) 1.8 0.0018 E18.5 retina ATCAGTTTGT (6) 3.6 0.0036 E18.5 retina CTGGGCCCAG (8) 3.6 0.0036 E18.5 retina CACTTCACTG (3) 1.8 0.0018 E18.5 retina CCCTTCACTG (2) 1.8 0.0018 E18.5 retina CTTTTCCTTT (7) 1.8 0.0018 E18.5 retina TGTGTGCCTA (2) 1.8 0.0018 P0.5 retina CTGGGCCCAG (8) 7.9 0.0079 P0.5 retina CCCTTCACTG (2) 5.9 0.0059 P0.5 retina CTTTTCCTTT (7) 5.9 0.0059 P0.5 retina ATCAGTTTGT (6) 2 0.002 P0.5 retina ATGCTGAGGA (4) 2 0.002 P0.5 retina TGTGTGCCTA (2) 2 0.002 P2.5 retina CTGGGCCCAG (8) 15.8 0.0158 P2.5 retina CTTTTCCTTT (7) 3.5 0.0035 P2.5 retina ATGCTGAGGA (4) 1.8 0.0018 P2.5 retina CCCTTCACTG (2) 1.8 0.0018 P4.5 retina CTGGGCCCAG (8) 11.9 0.0119 P4.5 retina ATCAGTTTGT (6) 2 0.002 P6.5 retina CTGGGCCCAG (8) 11.7 0.0117 P6.5 retina CCCTTCACTG (2) 8.3 0.0083 P6.5 retina ATGCTGAGGA (4) 1.7 0.0017 P6.5 retina CACTTCACTG (3) 1.7 0.0017 P6.5 retina TGTGTGCCTA (2) 1.7 0.0017 P10.5 crx- retina CCCTTCACTG (2) 11.1 0.0111 P10.5 crx- retina AAGCTGTTGA (10) 3.7 0.0037 P10.5 crx- retina GAGGATGCAG (6) 3.7 0.0037 P10.5 crx- retina ATCAGTTTGT (6) 1.9 0.0019 P10.5 crx- retina ATGGCTGAGG (4) 1.9 0.0019 P10.5 crx- retina CTGGGCCCAG (8) 1.9 0.0019 P10.5 crx- retina CTTTTCCTTT (7) 1.9 0.0019 P10.5 crx+ retina CTGGGCCCAG (8) 23.1 0.0231 P10.5 crx+ retina ATCAGTTTGT (6) 3.8 0.0038 P10.5 crx+ retina CCCTTCACTG (2) 1.9 0.0019 P10.5 crx+ retina GCTACACTCT (7) 1.9 0.0019 Adult retinal CTGGGCCCAG (8) 13 0.013 Adult retinal ATCAGTTTGT (6) 5.6 0.0056 Adult retinal CCCTTCACTG (2) 5.6 0.0056 Adult retinal ATGGCTGAGG (4) 1.9 0.0019 Adult retinal CACTTCACTG (3) 1.9 0.0019 Adult retinal GAGCAGACCC (9) 1.9 0.0019 ONL ATCAGTTTGT (6) 1.9 0.0019 ONL ATGACACAAA (5) 1.9 0.0019 ONL CCCTTCACTG (2) 1.9 0.0019 ONL CTTTTCCTTT (7) 1.9 0.0019 ONL GACCTGGAGA (3) 1.9 0.0019 ONL GAGGATGCAG (6) 1.9 0.0019