Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290027	Ncbp2	nuclear cap binding protein subunit 2	16		68092
Gene Ontology	mRNA processing | mRNA-nucleus export | nucleic acid binding | nucleus | RNA binding | snRNA-nucleus export | transport
Human Homolog	NCBP2[nuclear cap binding protein subunit 2, 20kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTCCCAAAA (3) 4.9 0.0049 P8 Cb GC GGGACTGAGG (3) 1.6 0.0016 P8 Cb GC GTTGGGTCAC (2) 1.6 0.0016 P8 Cb GC TAAAATTAGT (3) 1.6 0.0016 P8 Cb GC TCGGGTGGGT (6) 1.6 0.0016 P8 Cb GC TTTTTTTAAG (3) 1.6 0.0016 Cb medulloblastoma GGGCGTTTTG 2.3 0.0023 Cb medulloblastoma TCGGGTGGGT (6) 2.3 0.0023 Cb medulloblastoma TTTCCCAAAA (3) 2.3 0.0023 P8 GC+1d culture TTTCCCAAAA (3) 9.1 0.0091 P8 GC+1d culture TATTAATAAG (2) 8 0.008 P8 GC+1d culture TAAAATTAGT (3) 4.6 0.0046 P8 GC+1d culture TCGGGTGGGT (6) 2.3 0.0023 P8 GC+1d culture GACCTCAGTA 1.1 0.0011 P8 GC+1d culture GGGCGTTTTG 1.1 0.0011 P8 GC+1d culture GTTGGGTCAC (2) 1.1 0.0011 P8 GC+1d culture TAATTACAAA (7) 1.1 0.0011 P8 GC+1d culture TGGGTACTGT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTCCCAAAA (3) 7 0.007 P8 GC+SHH+1d culture GACCTCAGTA 2.3 0.0023 P8 GC+SHH+1d culture CTTTAGTGAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TCGGGTGGGT (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTACTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTTTTAAG (3) 1.2 0.0012 3T3 fibroblasts GTTGGGTCAC (2) 3.5 0.0035 E15 cortex GACCTCAGCA (10) 9.9 0.0099 E15 cortex GGGCGTTTTG 4.9 0.0049 E15 cortex TCGGGTGGGT (6) 4.9 0.0049 P1 cortex GACCTCAGTA 4.5 0.0045 Hypothalamus TAAAATTAGT (3) 3.6 0.0036 Hypothalamus CTTTAGTGAC (2) 1.8 0.0018 Hypothalamus GACCTCAGCA (10) 1.8 0.0018 Hypothalamus GGGACTGAGG (3) 1.8 0.0018 Hypothalamus TATTAATAAG (2) 1.8 0.0018 E12.5 retina TATTAATAAG (2) 3.8 0.0038 E12.5 retina TTTCCCAAAA (3) 3.8 0.0038 E12.5 retina GACCTCAGTA 1.9 0.0019 E12.5 retina TAAAATTAGT (3) 1.9 0.0019 E12.5 retina TCGGGTGGGT (6) 1.9 0.0019 E12.5 retina TGGGTACTGT (2) 1.9 0.0019 E14.5 retina CTTTAGTGAC (2) 5.5 0.0055 E14.5 retina TAATTACAAA (7) 3.6 0.0036 E14.5 retina TATTAATAAG (2) 3.6 0.0036 E14.5 retina TCGGGTGGGT (6) 3.6 0.0036 E14.5 retina TAAAATTAGT (3) 1.8 0.0018 E14.5 retina TTTCCCAAAA (3) 1.8 0.0018 E16.5 retina CTTTAGTGAC (2) 7.2 0.0072 E16.5 retina TCGGGTGGGT (6) 5.4 0.0054 E16.5 retina TTTCCCAAAA (3) 5.4 0.0054 E16.5 retina GACCTCAGTA 3.6 0.0036 E16.5 retina TAATTACAAA (7) 1.8 0.0018 E16.5 retina TATTAATAAG (2) 1.8 0.0018 E16.5 retina TGGGTTCCTG 1.8 0.0018 E18.5 retina TAATTACAAA (7) 7.3 0.0073 E18.5 retina CTTTAGTGAC (2) 3.6 0.0036 E18.5 retina GACCTCAGTA 1.8 0.0018 E18.5 retina TATTAATAAG (2) 1.8 0.0018 E18.5 retina TCGGGTGGGT (6) 1.8 0.0018 P0.5 retina GTTGGGTCAC (2) 3.9 0.0039 P0.5 retina TAAAATTAGT (3) 3.9 0.0039 P0.5 retina CTTTAGTGAC (2) 2 0.002 P0.5 retina GGGACTGAGG (3) 2 0.002 P0.5 retina TATTAATAAG (2) 2 0.002 P0.5 retina TCGGGTGGGT (6) 2 0.002 P2.5 retina TTTCCCAAAA (3) 5.3 0.0053 P2.5 retina GACCTCAGTA 1.8 0.0018 P2.5 retina TAAAATTAGT (3) 1.8 0.0018 P2.5 retina TAATTACAAA (7) 1.8 0.0018 P2.5 retina TATTAATAAG (2) 1.8 0.0018 P4.5 retina TAAAATTAGT (3) 5.9 0.0059 P4.5 retina TTTCCCAAAA (3) 4 0.004 P4.5 retina CTTTAGTGAC (2) 2 0.002 P4.5 retina GACCTCAGTA 2 0.002 P4.5 retina TAATTACAAA (7) 2 0.002 P6.5 retina TATTAATAAG (2) 5 0.005 P6.5 retina TAAAATTAGT (3) 3.3 0.0033 P6.5 retina TTTCCCAAAA (3) 3.3 0.0033 P6.5 retina GACCTCAGTA 1.7 0.0017 P6.5 retina GGGCGTTTTG 1.7 0.0017 P6.5 retina TCGGGTGGGT (6) 1.7 0.0017 P10.5 crx- retina TATTAATAAG (2) 3.7 0.0037 P10.5 crx- retina TAAAATTAGT (3) 1.9 0.0019 P10.5 crx- retina TTTCCCAAAA (3) 1.9 0.0019 P10.5 crx+ retina TAAAATTAGT (3) 1.9 0.0019 P10.5 crx+ retina TCGGGTGGGT (6) 1.9 0.0019 P10.5 crx+ retina TGGGTTCCTG 1.9 0.0019 Adult retinal TAAAATTAGT (3) 1.9 0.0019 Adult retinal TAATTACAAA (7) 1.9 0.0019 Adult retinal TCGGGTGGGT (6) 1.9 0.0019 ONL TCGGGTGGGT (6) 3.8 0.0038 ONL TTTTTTTAAG (3) 3.8 0.0038 ONL TGGGTTCCTG 1.9 0.0019 ONL TTTCCCAAAA (3) 1.9 0.0019