Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290083	Scn3b	sodium channel, voltage-gated, type III, beta	9		235281
Gene Ontology	integral to membrane | ion channel activity | ion transport | sodium ion transport | voltage-gated ion channel activity | voltage-gated sodium channel activity
Human Homolog	SCN3B[sodium channel, voltage-gated, type III, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAATAAAGC (3) 6.5 0.0065 P8 Cb GC ACACAATAAA (4) 4.9 0.0049 P8 Cb GC AGAGCAGGGA (3) 3.3 0.0033 Cb medulloblastoma TCAATAAAGC (3) 11.6 0.0116 Cb medulloblastoma AGAGCAGGGA (3) 2.3 0.0023 P8 GC+1d culture TCAATAAAGC (3) 14.8 0.0148 P8 GC+1d culture ACACAATAAA (4) 3.4 0.0034 P8 GC+1d culture AGAGCAGGGA (3) 3.4 0.0034 P8 GC+1d culture GGAGCCCGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TCAATAAAGC (3) 11.7 0.0117 P8 GC+SHH+1d culture ACACAATAAA (4) 3.5 0.0035 P8 GC+SHH+1d culture AGAGCAGGGA (3) 3.5 0.0035 3T3 fibroblasts AGAGCAGGGA (3) 3.5 0.0035 3T3 fibroblasts TGCTGGCCTA (2) 3.5 0.0035 E15 cortex TCAATAAAGC (3) 9.9 0.0099 P1 cortex TCAATAAAGC (3) 45.5 0.0455 P1 cortex ACACAATAAA (4) 9.1 0.0091 Hypothalamus TCAATAAAGC (3) 29 0.029 Hypothalamus ACACAATAAA (4) 3.6 0.0036 Hypothalamus AGAGCAGGGA (3) 1.8 0.0018 E12.5 retina ACACAATAAA (4) 9.4 0.0094 E12.5 retina TCAATAAAGC (3) 7.5 0.0075 E12.5 retina AGAGCAGGGA (3) 1.9 0.0019 E14.5 retina TCAATAAAGC (3) 12.8 0.0128 E14.5 retina ACACAATAAA (4) 3.6 0.0036 E14.5 retina AGAGCAGGGA (3) 1.8 0.0018 E16.5 retina ACACAATAAA (4) 19.9 0.0199 E16.5 retina TCAATAAAGC (3) 19.9 0.0199 E18.5 retina ACACAATAAA (4) 20 0.02 E18.5 retina TCAATAAAGC (3) 18.2 0.0182 E18.5 retina AGAGCAGGGA (3) 1.8 0.0018 P0.5 retina TCAATAAAGC (3) 17.7 0.0177 P0.5 retina ACACAATAAA (4) 5.9 0.0059 P0.5 retina AGAGCAGGGA (3) 2 0.002 P0.5 retina GGAGCCCGGG (3) 2 0.002 P0.5 retina TGCTGGCCTA (2) 2 0.002 P2.5 retina TCAATAAAGC (3) 26.4 0.0264 P2.5 retina ACACAATAAA (4) 17.6 0.0176 P2.5 retina AGAGCAGGGA (3) 1.8 0.0018 P2.5 retina TGCTGGCCTA (2) 1.8 0.0018 P4.5 retina TCAATAAAGC (3) 13.9 0.0139 P4.5 retina ACACAATAAA (4) 11.9 0.0119 P4.5 retina AGAGCAGGGA (3) 4 0.004 P6.5 retina TCAATAAAGC (3) 21.7 0.0217 P6.5 retina ACACAATAAA (4) 18.3 0.0183 P6.5 retina AGAGCAGGGA (3) 1.7 0.0017 P10.5 crx- retina TCAATAAAGC (3) 18.6 0.0186 P10.5 crx- retina ACACAATAAA (4) 16.7 0.0167 P10.5 crx- retina AGAGCAGGGA (3) 1.9 0.0019 P10.5 crx+ retina TCAATAAAGC (3) 25 0.025 P10.5 crx+ retina ACACAATAAA (4) 9.6 0.0096 P10.5 crx+ retina GGAGCCCGGG (3) 1.9 0.0019 Adult retinal ACACAATAAA (4) 13 0.013 Adult retinal TCAATAAAGC (3) 13 0.013 ONL ACACAATAAA (4) 11.5 0.0115 ONL TCAATAAAGC (3) 5.7 0.0057 ONL AGAGCAGGGA (3) 1.9 0.0019