Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290183
4933412A08Rik
RIKEN cDNA 4933412A08 gene
19
74445
Mm.290183
D19Ertd737e
DNA segment, Chr 19, ERATO Doi 737, expressed
19
19 57.0 cM
76539
Human Homolog
C10orf84[chromosome 10 open reading frame 84]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCCCCACCC (
8
)
22.8
0.0228
P8 Cb GC
CTCAGAACAG
(
5
)
4.9
0.0049
P8 Cb GC
TGGAATAAAT (
4
)
3.3
0.0033
P8 Cb GC
CACATACAAA
(
6
)
1.6
0.0016
Cb medulloblastoma
TTCCCCACCC (
8
)
9.2
0.0092
P8 GC+1d culture
TTCCCCACCC (
8
)
36.5
0.0365
P8 GC+1d culture
CTCAGAACAG
(
5
)
14.8
0.0148
P8 GC+1d culture
ACTGTACTTT
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGAATAAAT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TTCCCCACCC (
8
)
32.8
0.0328
P8 GC+SHH+1d culture
CTCAGAACAG
(
5
)
5.9
0.0059
P8 GC+SHH+1d culture
CTAAGAACAG
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGAATAAAT (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTGTACTTT
(
2
)
1.2
0.0012
3T3 fibroblasts
TTCCCCACCC (
8
)
10.5
0.0105
3T3 fibroblasts
CTAAGAACAG
(
5
)
3.5
0.0035
3T3 fibroblasts
CTCAGAACAG
(
5
)
3.5
0.0035
E15 cortex
TTCCCCACCC (
8
)
39.6
0.0396
E15 cortex
ACTGTACTTT
(
2
)
9.9
0.0099
P1 cortex
TTCCCCACCC (
8
)
22.7
0.0227
Hypothalamus
TTCCCCACCC (
8
)
10.9
0.0109
Hypothalamus
ACTGTACTTT
(
2
)
1.8
0.0018
Hypothalamus
CTCAGAACAG
(
5
)
1.8
0.0018
Hypothalamus
TGGAATAAAT (
4
)
1.8
0.0018
E12.5 retina
TTCCCCACCC (
8
)
28.2
0.0282
E12.5 retina
ACTGTACTTT
(
2
)
3.8
0.0038
E12.5 retina
CTAAGAACAG
(
5
)
3.8
0.0038
E12.5 retina
CTCAGAACAG
(
5
)
1.9
0.0019
E14.5 retina
TTCCCCACCC (
8
)
20
0.02
E16.5 retina
TTCCCCACCC (
8
)
29
0.029
E16.5 retina
CTAAGAACAG
(
5
)
1.8
0.0018
E18.5 retina
TTCCCCACCC (
8
)
61.8
0.0618
P0.5 retina
TTCCCCACCC (
8
)
82.4
0.0824
P0.5 retina
CTCAGAACAG
(
5
)
2
0.002
P2.5 retina
TTCCCCACCC (
8
)
70.4
0.0704
P2.5 retina
CTAAGAACAG
(
5
)
1.8
0.0018
P4.5 retina
TTCCCCACCC (
8
)
61.4
0.0614
P4.5 retina
ACTGTACTTT
(
2
)
4
0.004
P4.5 retina
CTAAGAACAG
(
5
)
2
0.002
P4.5 retina
TGGAATAAAT (
4
)
2
0.002
P6.5 retina
TTCCCCACCC (
8
)
46.7
0.0467
P6.5 retina
TGGAATAAAT (
4
)
3.3
0.0033
P10.5 crx- retina
TTCCCCACCC (
8
)
7.4
0.0074
P10.5 crx- retina
ACTGTACTTT
(
2
)
3.7
0.0037
P10.5 crx- retina
TGGAATAAAT (
4
)
1.9
0.0019
P10.5 crx+ retina
TTCCCCACCC (
8
)
19.2
0.0192
P10.5 crx+ retina
TGGAATAAAT (
4
)
5.8
0.0058
Adult retinal
TTCCCCACCC (
8
)
13
0.013
Adult retinal
TGGAATAAAT (
4
)
3.7
0.0037
Adult retinal
ACTGTACTTT
(
2
)
1.9
0.0019
ONL
TGGAATAAAT (
4
)
13.4
0.0134
ONL
TTCCCCACCC (
8
)
9.6
0.0096
ONL
CACATACAAA
(
6
)
3.8
0.0038
ONL
ACTGTACTTT
(
2
)
1.9
0.0019
