Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2902	Ptprn	protein tyrosine phosphatase, receptor type, N	1	1 41.0 cM	19275
Gene Ontology	extracellular space | hydrolase activity | integral to membrane | membrane fraction | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRN[protein tyrosine phosphatase, receptor type, N]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAAGCCAG (4) 6.5 0.0065 P8 Cb GC GCCAAGTAAG (2) 1.6 0.0016 P8 Cb GC GGCAAAGGAG (8) 1.6 0.0016 Cb medulloblastoma AGGGAGGAGT (5) 2.3 0.0023 P8 GC+1d culture GCCAAGTAAG (2) 2.3 0.0023 P8 GC+1d culture GCCACAAAGT 2.3 0.0023 P8 GC+1d culture GGAAGCAGAC (3) 1.1 0.0011 P8 GC+SHH+1d culture GCCAAGCCAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GCCAAGTAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAAGGAG (8) 1.2 0.0012 3T3 fibroblasts GCCAAGTAAG (2) 14 0.014 3T3 fibroblasts GCCAAGCCAG (4) 7 0.007 3T3 fibroblasts AGGGAGGAGT (5) 3.5 0.0035 E15 cortex GCCAAGCCAG (4) 9.9 0.0099 E15 cortex GCCAAGTAAG (2) 9.9 0.0099 E15 cortex AGGGAGGAGT (5) 4.9 0.0049 P1 cortex GCCAAGTAAG (2) 13.6 0.0136 Hypothalamus GGAAGCAGAC (3) 7.2 0.0072 Hypothalamus GCCAAGTAAG (2) 3.6 0.0036 E12.5 retina GCCAAGTAAG (2) 3.8 0.0038 E14.5 retina GCCAAGCCAG (4) 5.5 0.0055 E14.5 retina GCCAAGTAAG (2) 1.8 0.0018 E14.5 retina GGAAGCAGAC (3) 1.8 0.0018 E14.5 retina GGCAAAGGAG (8) 1.8 0.0018 E16.5 retina GCCAAGCCAG (4) 3.6 0.0036 E16.5 retina GGAAGCAGAC (3) 3.6 0.0036 E16.5 retina GGCAAAGGAG (8) 1.8 0.0018 E18.5 retina GCCAAGTAAG (2) 1.8 0.0018 E18.5 retina GCCACAAAGT 1.8 0.0018 P0.5 retina GCCAAGCCAG (4) 3.9 0.0039 P0.5 retina GCCAAGTAAG (2) 2 0.002 P2.5 retina GGAAGCAGAC (3) 1.8 0.0018 P2.5 retina GGCAAAGGAG (8) 1.8 0.0018 P4.5 retina GCCACAAAGT 2 0.002 P6.5 retina GCCAAGCCAG (4) 6.7 0.0067 P6.5 retina GCCAAGTAAG (2) 1.7 0.0017 P10.5 crx- retina GCCAAGTAAG (2) 3.7 0.0037 P10.5 crx- retina GCCAAGCCAG (4) 1.9 0.0019 P10.5 crx- retina GGAAGCAGAC (3) 1.9 0.0019 P10.5 crx+ retina GCCAAGTAAG (2) 1.9 0.0019 Adult retinal GGAAGCAGAC (3) 3.7 0.0037 Adult retinal GCCAAGTAAG (2) 1.9 0.0019 ONL GGAAGCAGAC (3) 7.7 0.0077 ONL GCCAAGTAAG (2) 1.9 0.0019