Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290341
B230114J08Rik
RIKEN cDNA B230114J08 gene
16
77975
Gene Ontology
integral to membrane
Human Homolog
C21orf4[chromosome 21 open reading frame 4]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCAAGTGGA (
4
)
73.4
0.0734
Cb medulloblastoma
GCCAAGTGGA (
4
)
69.4
0.0694
Cb medulloblastoma
AATTTTGTTT
(
5
)
6.9
0.0069
Cb medulloblastoma
ACGCTGAAGT
4.6
0.0046
Cb medulloblastoma
CAGGCCTCAC
(
3
)
2.3
0.0023
P8 GC+1d culture
GCCAAGTGGA (
4
)
181.5
0.1815
P8 GC+1d culture
AATTTTGTTT
(
5
)
2.3
0.0023
P8 GC+1d culture
CAGGCCTCAC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCAAGTGGA (
4
)
160.4
0.1604
3T3 fibroblasts
GCCAAGTGGA (
4
)
199.8
0.1998
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
GCCAAGTGGA (
4
)
108.9
0.1089
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
GCCAAGTGGA (
4
)
81.8
0.0818
P1 cortex
CAGGCCTCAC
(
3
)
4.5
0.0045
Hypothalamus
GCCAAGTGGA (
4
)
43.5
0.0435
Hypothalamus
AATAGAGAAG
(
3
)
1.8
0.0018
Hypothalamus
AATTTTGTTT
(
5
)
1.8
0.0018
E12.5 retina
GCCAAGTGGA (
4
)
225.3
0.2253
E12.5 retina
AATTTTGTTT
(
5
)
1.9
0.0019
E14.5 retina
GCCAAGTGGA (
4
)
114.8
0.1148
E14.5 retina
AATTTTGTTT
(
5
)
3.6
0.0036
E14.5 retina
AATAGAGAAG
(
3
)
1.8
0.0018
E16.5 retina
GCCAAGTGGA (
4
)
217.3
0.2173
E16.5 retina
AATAGAGAAG
(
3
)
3.6
0.0036
E18.5 retina
GCCAAGTGGA (
4
)
87.3
0.0873
P0.5 retina
GCCAAGTGGA (
4
)
109.9
0.1099
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
AATTTTGTTT
(
5
)
2
0.002
P2.5 retina
GCCAAGTGGA (
4
)
103.8
0.1038
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GCCAAGTGGA (
4
)
103
0.103
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GCCAAGTGGA (
4
)
123.4
0.1234
P6.5 retina
AATTTTGTTT
(
5
)
5
0.005
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
GCCAAGTGGA (
4
)
133.8
0.1338
P10.5 crx- retina
AATTTTGTTT
(
5
)
5.6
0.0056
P10.5 crx- retina
AATAGAGAAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCCAAGTGGA (
4
)
84.6
0.0846
P10.5 crx+ retina
AATTTTGTTT
(
5
)
1.9
0.0019
P10.5 crx+ retina
ACGCTGAAGT
1.9
0.0019
Adult retinal
GCCAAGTGGA (
4
)
68.5
0.0685
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GCCAAGTGGA (
4
)
23
0.023
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
AATTTTGTTT
(
5
)
1.9
0.0019
