Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290433
Unc5b
unc-5 homolog B (C. elegans)
10
10 32.0 cM
107449
Gene Ontology
integral to membrane
|
receptor activity
Human Homolog
UNC5B[unc-5 homolog B (C. elegans)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGTGTG (
115
)
27.7
0.0277
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
GCTGTGTGTC
(
5
)
4.9
0.0049
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
TGTGTGTGTG (
115
)
30.1
0.0301
Cb medulloblastoma
GCTGTGTGTC
(
5
)
11.6
0.0116
P8 GC+1d culture
TGTGTGTGTG (
115
)
27.4
0.0274
P8 GC+1d culture
GCTGTGTGTC
(
5
)
16
0.016
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
GCCACAGAAG (
5
)
1.1
0.0011
P8 GC+1d culture
GTCCTGGGCT
(
5
)
1.1
0.0011
P8 GC+1d culture
TGAACACAGA (
4
)
1.1
0.0011
P8 GC+1d culture
TGTGTGTGGG (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGTGTGTG (
115
)
28.1
0.0281
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
GCTGTGTGTC
(
5
)
9.4
0.0094
P8 GC+SHH+1d culture
TGAACACAGA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCACAGAAG (
5
)
1.2
0.0012
3T3 fibroblasts
TGTGTGTGTG (
115
)
28
0.028
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
GTCCTGGGCT
(
5
)
3.5
0.0035
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
GCTGTGGGGT
(
5
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
TGTGTGTGTG (
115
)
18.2
0.0182
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
TGTGTGTGTG (
115
)
25.4
0.0254
Hypothalamus
GCCACAGAAG (
5
)
3.6
0.0036
Hypothalamus
GTCCTGGGCT
(
5
)
1.8
0.0018
E12.5 retina
TGTGTGTGTG (
115
)
43.2
0.0432
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
CTCCCAAACA
(
2
)
1.9
0.0019
E12.5 retina
GCTGTGTGTC
(
5
)
1.9
0.0019
E14.5 retina
TGTGTGTGTG (
115
)
54.7
0.0547
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
CTCCCAAACA
(
2
)
1.8
0.0018
E16.5 retina
TGTGTGTGTG (
115
)
39.8
0.0398
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E18.5 retina
TGTGTGTGTG (
115
)
47.3
0.0473
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
TGTGTGTGGG (
2
)
1.8
0.0018
P0.5 retina
TGTGTGTGTG (
115
)
21.6
0.0216
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
TCTTCACTCC (
7
)
2
0.002
P0.5 retina
TTCACACCCT
2
0.002
P2.5 retina
TGTGTGTGTG (
115
)
35.2
0.0352
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
TCTTCACTCC (
7
)
1.8
0.0018
P4.5 retina
TGTGTGTGTG (
115
)
47.6
0.0476
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P6.5 retina
TGTGTGTGTG (
115
)
41.7
0.0417
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
TGTGTGTGGG (
2
)
1.7
0.0017
P6.5 retina
TTCACACCCT
1.7
0.0017
P10.5 crx- retina
TGTGTGTGTG (
115
)
59.4
0.0594
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
GCTGTGTGTC
(
5
)
1.9
0.0019
P10.5 crx- retina
GTCCTGGGCT
(
5
)
1.9
0.0019
P10.5 crx+ retina
TGTGTGTGTG (
115
)
44.2
0.0442
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
CTCCCAAACA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTCACACCCT
1.9
0.0019
Adult retinal
TGTGTGTGTG (
115
)
53.7
0.0537
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
GCTGTGTGTC
(
5
)
5.6
0.0056
Adult retinal
CTCCCAAACA
(
2
)
1.9
0.0019
ONL
TGTGTGTGTG (
115
)
23
0.023
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
GCTGTGGGGT
(
5
)
1.9
0.0019
ONL
TCTTCACTCC (
7
)
1.9
0.0019
ONL
TTCACACCCT
1.9
0.0019
