Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290810
2610304G08Rik
RIKEN cDNA 2610304G08 gene
2
70470
Human Homolog
C20orf77[chromosome 20 open reading frame 77]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CCCCCAGTCT
3.3
0.0033
P8 Cb GC
TCTGTTACTA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
CCCCCAGTCT
4.6
0.0046
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TCTGTTACTA
(
3
)
3.4
0.0034
P8 GC+1d culture
CAGAGAGAGG (
6
)
1.1
0.0011
P8 GC+1d culture
TCTCCTTATC
1.1
0.0011
P8 GC+1d culture
TTCTCCTTCT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CAGAGAGAGG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
TCTCCTTATC
2.3
0.0023
P8 GC+SHH+1d culture
CCCCCAGTCT
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
CCCCCAGTCT
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
TCCTTGGATG (
2
)
9.9
0.0099
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CCCCCAGTCT
4.5
0.0045
P1 cortex
TCCTTGGATG (
2
)
4.5
0.0045
P1 cortex
TCTGTTACTA
(
3
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
CAGAGAGAGG (
6
)
1.8
0.0018
Hypothalamus
TGCTTGCTGG (
5
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
CCCCCAGTCT
3.8
0.0038
E12.5 retina
TCTCCTTATC
1.9
0.0019
E12.5 retina
TCTGTTACTA
(
3
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TGCTTGCTGG (
5
)
5.5
0.0055
E14.5 retina
TCTGTTACTA
(
3
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TGCTTGCTGG (
5
)
5.4
0.0054
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TGCTTGCTGG (
5
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CCCCCAGTCT
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TCTCCTTATC
3.5
0.0035
P2.5 retina
CAGAGAGAGG (
6
)
1.8
0.0018
P2.5 retina
TGCTTGCTGG (
5
)
1.8
0.0018
P2.5 retina
TTCTCCTTCT (
3
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
CCCCCAGTCT
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TCTCCTTATC
5
0.005
P6.5 retina
CCCCCAGTCT
1.7
0.0017
P6.5 retina
TCTGTTACTA
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
TGCTTGCTGG (
5
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CAGAGAGAGG (
6
)
1.9
0.0019
P10.5 crx+ retina
TCTGTTACTA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGCTTGCTGG (
5
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TCTCCTTATC
1.9
0.0019
Adult retinal
TCTGTTACTA
(
3
)
1.9
0.0019
Adult retinal
TTCTCCTTCT (
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TGCTTGCTGG (
5
)
5.7
0.0057
