Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290816
2810453I06Rik
RIKEN cDNA 2810453I06 gene
5
67238
Human Homolog
MGC12966[hypothetical protein MGC12966]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GGCTATTTTA
(
2
)
3.3
0.0033
P8 Cb GC
AAGAGTCTTT (
3
)
1.6
0.0016
P8 Cb GC
GGTGGCTTCC (
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GGCTATTTTA
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GGCTATTTTA
(
2
)
4.6
0.0046
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GGCTATTTTA
(
2
)
7
0.007
P8 GC+SHH+1d culture
AAGAGTCTTT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTATTTATAA
(
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGCTATTTTA
(
2
)
9.9
0.0099
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AAGAGTCTTT (
3
)
18.2
0.0182
P1 cortex
GGCTATTTTA
(
2
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAGAGTCTTT (
3
)
3.6
0.0036
Hypothalamus
GGCTATTTTA
(
2
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GGCTATTTTA
(
2
)
5.6
0.0056
E12.5 retina
AAGAGTCTTT (
3
)
1.9
0.0019
E12.5 retina
GTATTTATAA
(
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GGCTATTTTA
(
2
)
5.5
0.0055
E14.5 retina
AAGAGTCTTT (
3
)
1.8
0.0018
E14.5 retina
GGTGGCTTCC (
4
)
1.8
0.0018
E14.5 retina
GTATTTATAA
(
3
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GGCTATTTTA
(
2
)
9.1
0.0091
E16.5 retina
AAGAGTCTTT (
3
)
3.6
0.0036
E16.5 retina
GTATTTATAA
(
3
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GGCTATTTTA
(
2
)
20
0.02
E18.5 retina
GTATTTATAA
(
3
)
5.5
0.0055
E18.5 retina
AAGAGTCTTT (
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AAGAGTCTTT (
3
)
5.9
0.0059
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
GGCTATTTTA
(
2
)
2
0.002
P0.5 retina
GTATTTATAA
(
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGCTATTTTA
(
2
)
8.8
0.0088
P2.5 retina
AAGAGTCTTT (
3
)
7
0.007
P2.5 retina
GTATTTATAA
(
3
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GGCTATTTTA
(
2
)
7.9
0.0079
P4.5 retina
AAGAGTCTTT (
3
)
4
0.004
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAGAGTCTTT (
3
)
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
GGCTATTTTA
(
2
)
1.7
0.0017
P6.5 retina
GGTGGCTTCC (
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GGCTATTTTA
(
2
)
9.3
0.0093
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GGCTATTTTA
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAGAGTCTTT (
3
)
1.9
0.0019
Adult retinal
GGCTATTTTA
(
2
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GTCATAGCTG (
590
)
5.7
0.0057
