Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290876	Sod2	superoxide dismutase 2, mitochondrial	17	17 7.6 cM	20656
Gene Ontology	manganese ion binding | manganese superoxide dismutase activity | manganese superoxide dismutase activity | manganese superoxide dismutase activity | metal ion binding | mitochondrion | oxidoreductase activity | superoxide dismutase activity | superoxide metabolism
Human Homolog	SOD2[superoxide dismutase 2, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTTTATTT (3) 3.3 0.0033 P8 Cb GC GATTTTATGA (3) 1.6 0.0016 Cb medulloblastoma CAGCTGCACC (3) 4.6 0.0046 Cb medulloblastoma GAAGACAGAA (6) 2.3 0.0023 Cb medulloblastoma GATTTTATGA (3) 2.3 0.0023 P8 GC+1d culture GATTTTATGA (3) 6.8 0.0068 P8 GC+1d culture CAGCTGCACC (3) 3.4 0.0034 P8 GC+1d culture CGGCCTACGT 1.1 0.0011 P8 GC+SHH+1d culture CAGCTGCACC (3) 4.7 0.0047 P8 GC+SHH+1d culture GATTTTATGA (3) 4.7 0.0047 P8 GC+SHH+1d culture GCCTTTATTT (3) 3.5 0.0035 P8 GC+SHH+1d culture CGGCCTACGT 2.3 0.0023 3T3 fibroblasts CAGCTGCACC (3) 7 0.007 P1 cortex GATTTTATGA (3) 9.1 0.0091 P1 cortex GCCTTTATTT (3) 4.5 0.0045 Hypothalamus CTGGGGATTG (4) 3.6 0.0036 Hypothalamus GAAGACAGAA (6) 1.8 0.0018 Hypothalamus GATTTTATGA (3) 1.8 0.0018 Hypothalamus GCCTTTATTT (3) 1.8 0.0018 E12.5 retina GATTTTATGA (3) 13.1 0.0131 E14.5 retina GATTTTATGA (3) 12.8 0.0128 E14.5 retina GCCTTTATTT (3) 1.8 0.0018 E16.5 retina GATTTTATGA (3) 10.9 0.0109 E16.5 retina CTGGGGATTG (4) 1.8 0.0018 E16.5 retina GCCTTTATTT (3) 1.8 0.0018 E18.5 retina GATTTTATGA (3) 10.9 0.0109 E18.5 retina CAGCTGCACC (3) 3.6 0.0036 E18.5 retina GCCTTTATTT (3) 1.8 0.0018 P0.5 retina GATTTTATGA (3) 9.8 0.0098 P0.5 retina CAGCTGCACC (3) 2 0.002 P0.5 retina GCCTTTATTT (3) 2 0.002 P2.5 retina GATTTTATGA (3) 14.1 0.0141 P2.5 retina CAGCTGCACC (3) 1.8 0.0018 P2.5 retina GAAGACAGAA (6) 1.8 0.0018 P4.5 retina GATTTTATGA (3) 13.9 0.0139 P4.5 retina CAGCTGCACC (3) 2 0.002 P4.5 retina GAAGACAGAA (6) 2 0.002 P6.5 retina GATTTTATGA (3) 10 0.01 P6.5 retina GCCTTTATTT (3) 3.3 0.0033 P6.5 retina CAGCTGCACC (3) 1.7 0.0017 P6.5 retina GAAGACAGAA (6) 1.7 0.0017 P10.5 crx- retina GATTTTATGA (3) 9.3 0.0093 P10.5 crx+ retina GATTTTATGA (3) 15.4 0.0154 P10.5 crx+ retina GCCTTTATTT (3) 1.9 0.0019 Adult retinal CAGCTGCACC (3) 9.3 0.0093 Adult retinal GATTTTATGA (3) 5.6 0.0056 ONL GATTTTATGA (3) 13.4 0.0134 ONL GCCTTTATTT (3) 3.8 0.0038 ONL GAAGACAGAA (6) 1.9 0.0019