Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290937
3830422I06Rik
RIKEN cDNA 3830422I06 gene
3
70708
Mm.290937
E430012K20Rik
RIKEN cDNA E430012K20 gene
3
99696
Human Homolog
KIAA1223[KIAA1223 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACAAAAAA (
18
)
3.3
0.0033
P8 Cb GC
AAGTGCAGAA
(
5
)
1.6
0.0016
Cb medulloblastoma
AGACAAAAAA (
18
)
13.9
0.0139
Cb medulloblastoma
AAGTGCAGAA
(
5
)
2.3
0.0023
Cb medulloblastoma
TGCCACGGTC
(
2
)
2.3
0.0023
Cb medulloblastoma
TGCTCATCTC (
4
)
2.3
0.0023
P8 GC+1d culture
AGACAAAAAA (
18
)
6.8
0.0068
P8 GC+1d culture
AAGTGCAGAA
(
5
)
2.3
0.0023
P8 GC+1d culture
CTGAAGCAGT
(
5
)
1.1
0.0011
P8 GC+1d culture
TGGAGGGCAC
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
AGACAAAAAA (
18
)
7
0.007
P8 GC+SHH+1d culture
AAGTGCAGAA
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
ATCCAATTTA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGAAGCAGT
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCCACGGTC
(
2
)
1.2
0.0012
3T3 fibroblasts
CTGAAGCAGT
(
5
)
7
0.007
3T3 fibroblasts
TGCCACGGTC
(
2
)
7
0.007
E15 cortex
AAGTGCAGAA
(
5
)
4.9
0.0049
E15 cortex
ATCCAATTTA (
4
)
4.9
0.0049
P1 cortex
AGACAAAAAA (
18
)
18.2
0.0182
P1 cortex
AAGTGCAGAA
(
5
)
4.5
0.0045
P1 cortex
CTGAAGCAGT
(
5
)
4.5
0.0045
Hypothalamus
AGACAAAAAA (
18
)
10.9
0.0109
Hypothalamus
AAGTGCAGAA
(
5
)
1.8
0.0018
Hypothalamus
ATCCAATTTA (
4
)
1.8
0.0018
E12.5 retina
AGACAAAAAA (
18
)
9.4
0.0094
E12.5 retina
AAGTGCAGAA
(
5
)
1.9
0.0019
E12.5 retina
CTGAAGCAGT
(
5
)
1.9
0.0019
E14.5 retina
AGACAAAAAA (
18
)
5.5
0.0055
E14.5 retina
AAGTGCAGAA
(
5
)
3.6
0.0036
E14.5 retina
ATCCAATTTA (
4
)
1.8
0.0018
E14.5 retina
CTGAAGCAGT
(
5
)
1.8
0.0018
E16.5 retina
AGACAAAAAA (
18
)
1.8
0.0018
E16.5 retina
TGCTCATCTC (
4
)
1.8
0.0018
E18.5 retina
AGACAAAAAA (
18
)
9.1
0.0091
E18.5 retina
ATCCAATTTA (
4
)
3.6
0.0036
E18.5 retina
AAGTGCAGAA
(
5
)
1.8
0.0018
E18.5 retina
CTGAAGCAGT
(
5
)
1.8
0.0018
P0.5 retina
ATCCAATTTA (
4
)
3.9
0.0039
P0.5 retina
AGACAAAAAA (
18
)
2
0.002
P2.5 retina
AGACAAAAAA (
18
)
7
0.007
P2.5 retina
ATCCAATTTA (
4
)
1.8
0.0018
P2.5 retina
CTGAAGCAGT
(
5
)
1.8
0.0018
P2.5 retina
TGGAGGGCAC
(
5
)
1.8
0.0018
P4.5 retina
AGACAAAAAA (
18
)
7.9
0.0079
P4.5 retina
ATCCAATTTA (
4
)
5.9
0.0059
P4.5 retina
CTGAAGCAGT
(
5
)
2
0.002
P6.5 retina
AGACAAAAAA (
18
)
15
0.015
P6.5 retina
AAGTGCAGAA
(
5
)
3.3
0.0033
P6.5 retina
TGCTCATCTC (
4
)
1.7
0.0017
P6.5 retina
TGGAGGGCAC
(
5
)
1.7
0.0017
P10.5 crx- retina
AGACAAAAAA (
18
)
3.7
0.0037
P10.5 crx- retina
TGGAGGGCAC
(
5
)
3.7
0.0037
P10.5 crx- retina
ATCCAATTTA (
4
)
1.9
0.0019
P10.5 crx+ retina
AGACAAAAAA (
18
)
11.5
0.0115
P10.5 crx+ retina
TGGAGGGCAC
(
5
)
5.8
0.0058
P10.5 crx+ retina
ATCCAATTTA (
4
)
3.8
0.0038
Adult retinal
AGACAAAAAA (
18
)
38.9
0.0389
Adult retinal
AAGTGCAGAA
(
5
)
1.9
0.0019
Adult retinal
ATCCAATTTA (
4
)
1.9
0.0019
ONL
AGACAAAAAA (
18
)
57.5
0.0575
ONL
AAGTGCAGAA
(
5
)
1.9
0.0019
ONL
TGGAGGGCAC
(
5
)
1.9
0.0019
