Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290950	Loh11cr2a	loss of heterozygosity, 11, chromosomal region 2, gene A homolog (human)	9		67776
Human Homolog	LOH11CR2A[loss of heterozygosity, 11, chromosomal region 2, gene A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGAAGACT (11) 24.5 0.0245 P8 Cb GC TTTTCTCTTG (7) 1.6 0.0016 Cb medulloblastoma CTGTTATGAA (2) 9.2 0.0092 Cb medulloblastoma GATGAAGACT (11) 4.6 0.0046 Cb medulloblastoma GAGCATCACT (4) 2.3 0.0023 Cb medulloblastoma TATAATTCTG (2) 2.3 0.0023 P8 GC+1d culture GATGAAGACT (11) 9.1 0.0091 P8 GC+1d culture AAAGAAAGCT (6) 1.1 0.0011 P8 GC+1d culture AAATGTCCAT (2) 1.1 0.0011 P8 GC+1d culture GAGCATCACT (4) 1.1 0.0011 P8 GC+1d culture TTTTCTCTTG (7) 1.1 0.0011 P8 GC+SHH+1d culture GATGAAGACT (11) 8.2 0.0082 P8 GC+SHH+1d culture AAATGTCCAT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTTCTCTTG (7) 1.2 0.0012 3T3 fibroblasts GATGAAGACT (11) 10.5 0.0105 E15 cortex GATGAAGACT (11) 19.8 0.0198 E15 cortex AAAGAAAGCT (6) 4.9 0.0049 P1 cortex AAGCAGACAG (6) 4.5 0.0045 P1 cortex GAGCATCACT (4) 4.5 0.0045 P1 cortex GATGAAGACT (11) 4.5 0.0045 Hypothalamus TATAATTCTG (2) 1.8 0.0018 E12.5 retina GATGAAGACT (11) 28.2 0.0282 E12.5 retina AAAGAAAGCT (6) 1.9 0.0019 E12.5 retina AAGCAGACAG (6) 1.9 0.0019 E12.5 retina GAGCATCACT (4) 1.9 0.0019 E14.5 retina GATGAAGACT (11) 5.5 0.0055 E16.5 retina GATGAAGACT (11) 10.9 0.0109 E16.5 retina GAGCATCACT (4) 1.8 0.0018 E16.5 retina TATAATTCTG (2) 1.8 0.0018 E18.5 retina GATGAAGACT (11) 5.5 0.0055 E18.5 retina AAGCAGACAG (6) 1.8 0.0018 P0.5 retina GATGAAGACT (11) 17.7 0.0177 P0.5 retina AAGCAGACAG (6) 3.9 0.0039 P2.5 retina GATGAAGACT (11) 14.1 0.0141 P4.5 retina GATGAAGACT (11) 5.9 0.0059 P4.5 retina CTGTTATGAA (2) 2 0.002 P6.5 retina GATGAAGACT (11) 11.7 0.0117 P10.5 crx- retina GATGAAGACT (11) 9.3 0.0093 P10.5 crx- retina AAGCAGACAG (6) 1.9 0.0019 P10.5 crx+ retina GATGAAGACT (11) 9.6 0.0096 Adult retinal GATGAAGACT (11) 20.4 0.0204 ONL GATGAAGACT (11) 7.7 0.0077