Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291279
Osbp
oxysterol binding protein
19
19 7.0 cM
76303
Gene Ontology
oxysterol binding
Human Homolog
OSBP[oxysterol binding protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 98 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GCTGATCCAA (
2
)
6.5
0.0065
P8 Cb GC
AAAGCAAAAA (
9
)
3.3
0.0033
P8 Cb GC
CTGTGGAAGA (
8
)
1.6
0.0016
P8 Cb GC
TGTGCAGTTG (
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AAAGCAAAAT
(
7
)
9.2
0.0092
Cb medulloblastoma
AAAGCAAAAA (
9
)
4.6
0.0046
Cb medulloblastoma
GCTGATCCAA (
2
)
2.3
0.0023
Cb medulloblastoma
TTAATTTATT (
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AAAGCAAAAA (
9
)
5.7
0.0057
P8 GC+1d culture
CTGTGGAAGA (
8
)
4.6
0.0046
P8 GC+1d culture
TGTGCAGTTG (
4
)
2.3
0.0023
P8 GC+1d culture
AAAGCAAAAT
(
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AAAGCAAAAT
(
7
)
5.9
0.0059
P8 GC+SHH+1d culture
CTGTGGAAGA (
8
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGGAAAAA (
20
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTGCAGTTG (
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GCTGATCCAA (
2
)
7
0.007
3T3 fibroblasts
CTGTGGAAGA (
8
)
3.5
0.0035
3T3 fibroblasts
TGTGCAGTTG (
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GGGGGAAAAA (
20
)
9.9
0.0099
E15 cortex
AAAGCAAAAT
(
7
)
4.9
0.0049
E15 cortex
CTGTGGAAGA (
8
)
4.9
0.0049
E15 cortex
GCCCAGAACA
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
CTGTGGAAGA (
8
)
4.5
0.0045
P1 cortex
GGGGGAAAAA (
20
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AAAGCAAAAT
(
7
)
5.4
0.0054
Hypothalamus
TGTGGCAGTG (
6
)
3.6
0.0036
Hypothalamus
GGGGGAAAAA (
20
)
1.8
0.0018
Hypothalamus
TGACTTTATT
(
4
)
1.8
0.0018
Hypothalamus
TTAATTTATT (
4
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
CTGTGGAAGA (
8
)
7.5
0.0075
E12.5 retina
AAAGCAAAAA (
9
)
1.9
0.0019
E12.5 retina
GCTGATCCAA (
2
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TTAATTTATT (
4
)
7.3
0.0073
E14.5 retina
AAAGCAAAAA (
9
)
1.8
0.0018
E14.5 retina
AAAGCAAAAT
(
7
)
1.8
0.0018
E14.5 retina
TGACTTTATT
(
4
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
AAAGCAAAAT
(
7
)
5.4
0.0054
E16.5 retina
AAAGCAAAAA (
9
)
3.6
0.0036
E16.5 retina
CTGTGGAAGA (
8
)
3.6
0.0036
E16.5 retina
TTAATTTATT (
4
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AAAGCAAAAT
(
7
)
5.5
0.0055
E18.5 retina
AAAGCAAAAA (
9
)
3.6
0.0036
E18.5 retina
CTGTGGAAGA (
8
)
1.8
0.0018
E18.5 retina
GCTGATCCAA (
2
)
1.8
0.0018
E18.5 retina
GGGGGAAAAA (
20
)
1.8
0.0018
E18.5 retina
TTAATTTATT (
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AAAGCAAAAT
(
7
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AAAGCAAAAT
(
7
)
5.3
0.0053
P2.5 retina
CTGTGGAAGA (
8
)
3.5
0.0035
P2.5 retina
GCTGATCCAA (
2
)
1.8
0.0018
P2.5 retina
GGGGGAAAAA (
20
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AAAGCAAAAA (
9
)
15.9
0.0159
P4.5 retina
AAAGCAAAAT
(
7
)
9.9
0.0099
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AAAGCAAAAA (
9
)
8.3
0.0083
P6.5 retina
CTGTGGAAGA (
8
)
3.3
0.0033
P6.5 retina
TGTGCAGTTG (
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AAAGCAAAAT
(
7
)
5.6
0.0056
P10.5 crx- retina
AAAGCAAAAA (
9
)
1.9
0.0019
P10.5 crx- retina
CTGTGGAAGA (
8
)
1.9
0.0019
P10.5 crx- retina
GCTGATCCAA (
2
)
1.9
0.0019
P10.5 crx- retina
TGTGGCAGTG (
6
)
1.9
0.0019
P10.5 crx- retina
TTAATTTATT (
4
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AAAGCAAAAA (
9
)
15.4
0.0154
P10.5 crx+ retina
AAAGCAAAAT
(
7
)
7.7
0.0077
P10.5 crx+ retina
TGTGGCAGTG (
6
)
7.7
0.0077
P10.5 crx+ retina
GCTGATCCAA (
2
)
3.8
0.0038
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AAAGCAAAAA (
9
)
14.8
0.0148
Adult retinal
AAAGCAAAAT
(
7
)
7.4
0.0074
Adult retinal
GCTGATCCAA (
2
)
3.7
0.0037
Adult retinal
CTGTGGAAGA (
8
)
1.9
0.0019
Adult retinal
TGTGCAGTTG (
4
)
1.9
0.0019
Adult retinal
TGTGGCAGTG (
6
)
1.9
0.0019
Adult retinal
TTAATTTATT (
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
AAAGCAAAAA (
9
)
21.1
0.0211
ONL
AAAGCAAAAT
(
7
)
21.1
0.0211
ONL
CTGTGGAAGA (
8
)
3.8
0.0038
ONL
TGTGCAGTTG (
4
)
1.9
0.0019
