Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291461
AA408278
expressed sequence AA408278
8
101934
Mm.291461
6030458H05
hypothetical protein 6030458H05
8
270066
Human Homolog
SLC35E1[solute carrier family 35, member E1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGGTAATCT (
3
)
24.5
0.0245
P8 Cb GC
AAGTCCTGGC
(
6
)
1.6
0.0016
P8 Cb GC
GACACGAGTC
(
3
)
1.6
0.0016
Cb medulloblastoma
TTGGTAATCT (
3
)
13.9
0.0139
Cb medulloblastoma
AAGTCCTGGC
(
6
)
9.2
0.0092
Cb medulloblastoma
CTCTTGCTTT
(
5
)
2.3
0.0023
P8 GC+1d culture
TTGGTAATCT (
3
)
25.1
0.0251
P8 GC+1d culture
AAGTCCTGGC
(
6
)
1.1
0.0011
P8 GC+1d culture
CTCTTGCTTT
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TTGGTAATCT (
3
)
35.1
0.0351
P8 GC+SHH+1d culture
GCACCCCAGT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGTCCTGGC
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGACCTCTG
(
6
)
1.2
0.0012
3T3 fibroblasts
AAGTCCTGGC
(
6
)
3.5
0.0035
E15 cortex
AGTTCAAGGT (
4
)
9.9
0.0099
E15 cortex
GACACGAGTC
(
3
)
9.9
0.0099
P1 cortex
TTGGTAATCT (
3
)
4.5
0.0045
Hypothalamus
TTGGTAATCT (
3
)
12.7
0.0127
Hypothalamus
AAGTCCTGGC
(
6
)
3.6
0.0036
Hypothalamus
GACACGAGTC
(
3
)
1.8
0.0018
Hypothalamus
GCACCCCAGT
(
4
)
1.8
0.0018
E12.5 retina
TTGGTAATCT (
3
)
18.8
0.0188
E12.5 retina
CTCTTGCTTT
(
5
)
3.8
0.0038
E12.5 retina
GAGACCTCTG
(
6
)
1.9
0.0019
E14.5 retina
TTGGTAATCT (
3
)
23.7
0.0237
E16.5 retina
TTGGTAATCT (
3
)
18.1
0.0181
E16.5 retina
CTCTTGCTTT
(
5
)
1.8
0.0018
E18.5 retina
TTGGTAATCT (
3
)
41.8
0.0418
P0.5 retina
TTGGTAATCT (
3
)
23.6
0.0236
P0.5 retina
AAGTCCTGGC
(
6
)
2
0.002
P0.5 retina
CTCTTGCTTT
(
5
)
2
0.002
P2.5 retina
TTGGTAATCT (
3
)
19.4
0.0194
P2.5 retina
GAGACCTCTG
(
6
)
1.8
0.0018
P4.5 retina
TTGGTAATCT (
3
)
41.6
0.0416
P4.5 retina
GAGACCTCTG
(
6
)
4
0.004
P4.5 retina
AAGTCCTGGC
(
6
)
2
0.002
P4.5 retina
GACACGAGTC
(
3
)
2
0.002
P6.5 retina
TTGGTAATCT (
3
)
30
0.03
P6.5 retina
AGTTCAAGGT (
4
)
1.7
0.0017
P6.5 retina
CTCTTGCTTT
(
5
)
1.7
0.0017
P6.5 retina
GAGACCTCTG
(
6
)
1.7
0.0017
P10.5 crx- retina
TTGGTAATCT (
3
)
11.1
0.0111
P10.5 crx- retina
AAGTCCTGGC
(
6
)
3.7
0.0037
P10.5 crx- retina
CTCTTGCTTT
(
5
)
3.7
0.0037
P10.5 crx+ retina
TTGGTAATCT (
3
)
13.5
0.0135
P10.5 crx+ retina
AAGTCCTGGC
(
6
)
1.9
0.0019
P10.5 crx+ retina
GACACGAGTC
(
3
)
1.9
0.0019
Adult retinal
TTGGTAATCT (
3
)
7.4
0.0074
Adult retinal
GAGACCTCTG
(
6
)
3.7
0.0037
Adult retinal
AGTTCAAGGT (
4
)
1.9
0.0019
Adult retinal
CTCTTGCTTT
(
5
)
1.9
0.0019
ONL
TTGGTAATCT (
3
)
26.8
0.0268
ONL
AGTTCAAGGT (
4
)
9.6
0.0096
ONL
CTCTTGCTTT
(
5
)
1.9
0.0019
