Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291745	D1Wsu40e	DNA segment, Chr 1, Wayne State University 40, expressed	1	1 17.0 cM	27993
Gene Ontology	nucleolus | ribonucleoprotein complex | RNA binding | rRNA processing | snoRNP binding | viral nucleocapsid
Human Homolog	IMP4[U3 snoRNP protein 4 homolog]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTACAAGAA (5) 63.6 0.0636 P8 Cb GC AATAAACGCC 4.9 0.0049 P8 Cb GC TGACTGCTGA (2) 1.6 0.0016 Cb medulloblastoma TCTACAAGAA (5) 18.5 0.0185 Cb medulloblastoma AATAAACGCC 2.3 0.0023 Cb medulloblastoma CTTCCTCAGA (3) 2.3 0.0023 P8 GC+1d culture TCTACAAGAA (5) 119.9 0.1199 P8 GC+1d culture AATAAACGCC 6.8 0.0068 P8 GC+1d culture TCTACGAGAA 3.4 0.0034 P8 GC+1d culture GCTTTGCGTG 1.1 0.0011 P8 GC+SHH+1d culture TCTACAAGAA (5) 125.3 0.1253 P8 GC+SHH+1d culture AATAAACGCC 8.2 0.0082 P8 GC+SHH+1d culture AAATATTAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCTACGAGAA 1.2 0.0012 P8 GC+SHH+1d culture TGACTGCTGA (2) 1.2 0.0012 3T3 fibroblasts GCATTTCCTT (5) 7 0.007 3T3 fibroblasts TCTACAAGAA (5) 3.5 0.0035 E15 cortex TCTACAAGAA (5) 39.6 0.0396 E15 cortex AATAAACGCC 4.9 0.0049 P1 cortex TCTACAAGAA (5) 72.7 0.0727 P1 cortex AATAAACGCC 4.5 0.0045 Hypothalamus TCTACAAGAA (5) 38 0.038 Hypothalamus AATAAACGCC 9.1 0.0091 Hypothalamus AAATATTAAG (2) 1.8 0.0018 Hypothalamus GCATTTCCTT (5) 1.8 0.0018 E12.5 retina TCTACAAGAA (5) 125.8 0.1258 E12.5 retina AATAAACGCC 1.9 0.0019 E14.5 retina TCTACAAGAA (5) 51 0.051 E14.5 retina AATAAACGCC 3.6 0.0036 E14.5 retina AAATATTAAG (2) 1.8 0.0018 E14.5 retina GCTTTGCGTG 1.8 0.0018 E16.5 retina TCTACAAGAA (5) 63.4 0.0634 E16.5 retina AATAAACGCC 3.6 0.0036 E16.5 retina AAATATTAAG (2) 1.8 0.0018 E16.5 retina TCTACGAGAA 1.8 0.0018 E18.5 retina TCTACAAGAA (5) 32.7 0.0327 E18.5 retina AATAAACGCC 12.7 0.0127 E18.5 retina GCATTTCCTT (5) 1.8 0.0018 E18.5 retina GCTTTGCGTG 1.8 0.0018 P0.5 retina TCTACAAGAA (5) 51 0.051 P0.5 retina AATAAACGCC 2 0.002 P2.5 retina TCTACAAGAA (5) 38.7 0.0387 P2.5 retina AATAAACGCC 1.8 0.0018 P2.5 retina GCATTTCCTT (5) 1.8 0.0018 P2.5 retina GCTTTGCGTG 1.8 0.0018 P2.5 retina TGACTGCTGA (2) 1.8 0.0018 P4.5 retina TCTACAAGAA (5) 25.8 0.0258 P4.5 retina AATAAACGCC 5.9 0.0059 P4.5 retina CTTCCTCAGA (3) 4 0.004 P6.5 retina TCTACAAGAA (5) 38.3 0.0383 P6.5 retina AATAAACGCC 6.7 0.0067 P6.5 retina GCTTTGCGTG 3.3 0.0033 P10.5 crx- retina TCTACAAGAA (5) 27.9 0.0279 P10.5 crx- retina AATAAACGCC 9.3 0.0093 P10.5 crx+ retina TCTACAAGAA (5) 25 0.025 P10.5 crx+ retina GCATTTCCTT (5) 1.9 0.0019 Adult retinal TCTACAAGAA (5) 9.3 0.0093 ONL TCTACAAGAA (5) 7.7 0.0077 ONL AATAAACGCC 1.9 0.0019