Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291783
Tulp3
tubby-like protein 3
6
6 62.5 cM
22158
Mm.291783
2310022L06Rik
RIKEN cDNA 2310022L06 gene
6
69552
Mm.291783
D6Ertd90e
DNA segment, Chr 6, ERATO Doi 90, expressed
6
6 62.0 cM
52080
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGCAACAGG (
4
)
3.3
0.0033
P8 Cb GC
GCCTCCTCAG (
5
)
1.6
0.0016
Cb medulloblastoma
GAGCAACAGG (
4
)
4.6
0.0046
Cb medulloblastoma
GACTCTGCTT (
5
)
2.3
0.0023
Cb medulloblastoma
GAGAACCTGA (
7
)
2.3
0.0023
P8 GC+1d culture
AATTCTATTT
(
3
)
1.1
0.0011
P8 GC+1d culture
GAGCAACAGG (
4
)
1.1
0.0011
P8 GC+1d culture
GTAGAAGGAG
(
12
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGCAACAGG (
4
)
7
0.007
P8 GC+SHH+1d culture
AATTCTATTT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTCACAGCTG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCTCCTCAG (
5
)
1.2
0.0012
E15 cortex
GAGCAACAGG (
4
)
9.9
0.0099
E15 cortex
GATCTCTGTG
(
6
)
4.9
0.0049
E15 cortex
GCCTCCTCAG (
5
)
4.9
0.0049
P1 cortex
CTCACAGCTG
(
4
)
4.5
0.0045
P1 cortex
GAGCAACAGG (
4
)
4.5
0.0045
Hypothalamus
CTCACAGCTG
(
4
)
1.8
0.0018
Hypothalamus
GAGCAACAGG (
4
)
1.8
0.0018
E12.5 retina
GAGCAACAGG (
4
)
9.4
0.0094
E12.5 retina
GCCTCCTCAG (
5
)
1.9
0.0019
E14.5 retina
GAGCAACAGG (
4
)
9.1
0.0091
E16.5 retina
AATTCTATTT
(
3
)
1.8
0.0018
E16.5 retina
GTAGAAGGAG
(
12
)
1.8
0.0018
E18.5 retina
GAGCAACAGG (
4
)
3.6
0.0036
E18.5 retina
GATCTCTGTG
(
6
)
1.8
0.0018
P0.5 retina
AATTCTATTT
(
3
)
2
0.002
P0.5 retina
GACTCTGCTT (
5
)
2
0.002
P0.5 retina
GAGAACCTGA (
7
)
2
0.002
P2.5 retina
GCCTCCTCAG (
5
)
3.5
0.0035
P2.5 retina
GTAGAAGGAG
(
12
)
3.5
0.0035
P2.5 retina
AATTCTATTT
(
3
)
1.8
0.0018
P2.5 retina
GATCTCTGTG
(
6
)
1.8
0.0018
P4.5 retina
GAGCAACAGG (
4
)
5.9
0.0059
P6.5 retina
GAGCAACAGG (
4
)
5
0.005
P10.5 crx- retina
GAGCAACAGG (
4
)
5.6
0.0056
P10.5 crx- retina
AATTCTATTT
(
3
)
3.7
0.0037
P10.5 crx- retina
GACTCTGCTT (
5
)
1.9
0.0019
P10.5 crx+ retina
GAGCAACAGG (
4
)
1.9
0.0019
Adult retinal
GAGCAACAGG (
4
)
3.7
0.0037
ONL
GACTCTGCTT (
5
)
3.8
0.0038
ONL
GAGAACCTGA (
7
)
1.9
0.0019
ONL
GAGCAACAGG (
4
)
1.9
0.0019
