Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291831	Gpld1	glycosylphosphatidylinositol specific phospholipase D1	13	13 13.0 cM	14756
Gene Ontology	cell adhesion | cell-matrix adhesion | extracellular | extracellular space | glycosylphosphatidylinositol phospholipase D activity | GPI anchor release | hydrolase activity | integral to membrane | integrin complex | integrin-mediated signaling pathway | phospholipase D activity | protein binding
Human Homolog	GPLD1[glycosylphosphatidylinositol specific phospholipase D1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTGCTGC (3) 8.2 0.0082 P8 Cb GC GGTCACATCT (4) 4.9 0.0049 P8 Cb GC AACCTGGACA (5) 1.6 0.0016 P8 Cb GC AGGAACTGTA (19) 1.6 0.0016 P8 Cb GC AGTCACCACA (3) 1.6 0.0016 P8 Cb GC TTATAAAAAT (3) 1.6 0.0016 P8 Cb GC TTGTGGTGAC (26) 1.6 0.0016 Cb medulloblastoma ATGTTGCTGC (3) 16.2 0.0162 Cb medulloblastoma GCCGAAAACT (2) 16.2 0.0162 Cb medulloblastoma TTGTGGTGAC (26) 6.9 0.0069 Cb medulloblastoma AACCTGGACA (5) 4.6 0.0046 Cb medulloblastoma GGTCACATCT (4) 4.6 0.0046 Cb medulloblastoma TTATAAAAAT (3) 4.6 0.0046 Cb medulloblastoma TAGAAATAGG 2.3 0.0023 Cb medulloblastoma TTTTAAAAAT (4) 2.3 0.0023 P8 GC+1d culture GGTCACATCT (4) 11.4 0.0114 P8 GC+1d culture TTGTGGTGAC (26) 9.1 0.0091 P8 GC+1d culture ATGTTGCTGC (3) 2.3 0.0023 P8 GC+1d culture AACCTGGACA (5) 1.1 0.0011 P8 GC+1d culture CCTCTAATCC (8) 1.1 0.0011 P8 GC+1d culture TAGAAATAGG 1.1 0.0011 P8 GC+SHH+1d culture GGTCACATCT (4) 9.4 0.0094 P8 GC+SHH+1d culture ATGTTGCTGC (3) 7 0.007 P8 GC+SHH+1d culture TTGTGGTGAC (26) 5.9 0.0059 P8 GC+SHH+1d culture AACCTGGACA (5) 1.2 0.0012 P8 GC+SHH+1d culture CCTCTAATCC (8) 1.2 0.0012 P8 GC+SHH+1d culture GGCTCTGCCA (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGTAGGTGT (3) 1.2 0.0012 3T3 fibroblasts ATGTTGCTGC (3) 7 0.007 3T3 fibroblasts AACCTGGACA (5) 3.5 0.0035 3T3 fibroblasts GGCTCTGCCA (6) 3.5 0.0035 E15 cortex GGTCACATCT (4) 19.8 0.0198 E15 cortex ATGTTGCTGC (3) 4.9 0.0049 E15 cortex CCTCTAATCC (8) 4.9 0.0049 E15 cortex GGCTCTGCCA (6) 4.9 0.0049 E15 cortex TTGTGGTGAC (26) 4.9 0.0049 P1 cortex ATGTTGCTGC (3) 9.1 0.0091 P1 cortex CCTCTAATCC (8) 9.1 0.0091 P1 cortex AGGAACTGTA (19) 4.5 0.0045 P1 cortex TAGAAATAGG 4.5 0.0045 P1 cortex TTGTGGTGAC (26) 4.5 0.0045 P1 cortex TTTTAAAAAT (4) 4.5 0.0045 Hypothalamus ATGTTGCTGC (3) 12.7 0.0127 Hypothalamus GCCGAAAACT (2) 10.9 0.0109 Hypothalamus GGTCACATCT (4) 9.1 0.0091 Hypothalamus TTGTGGTGAC (26) 7.2 0.0072 Hypothalamus CCTCTAATCC (8) 1.8 0.0018 E12.5 retina ATGTTGCTGC (3) 11.3 0.0113 E12.5 retina GGTCACATCT (4) 3.8 0.0038 E12.5 retina TTGTGGTGAC (26) 3.8 0.0038 E12.5 retina AACCTGGACA (5) 1.9 0.0019 E12.5 retina AGGAACTGTA (19) 1.9 0.0019 E12.5 retina GGCTCTGCCA (6) 1.9 0.0019 E14.5 retina ATGTTGCTGC (3) 20 0.02 E14.5 retina TTGTGGTGAC (26) 7.3 0.0073 E14.5 retina CCTCTAATCC (8) 3.6 0.0036 E14.5 retina GGTCACATCT (4) 3.6 0.0036 E14.5 retina AGGAACTGTA (19) 1.8 0.0018 E16.5 retina TTGTGGTGAC (26) 14.5 0.0145 E16.5 retina ATGTTGCTGC (3) 10.9 0.0109 E16.5 retina GGTCACATCT (4) 7.2 0.0072 E16.5 retina AACCTGGACA (5) 1.8 0.0018 E16.5 retina CCTCTAATCC (8) 1.8 0.0018 E18.5 retina TTGTGGTGAC (26) 9.1 0.0091 E18.5 retina ATGTTGCTGC (3) 5.5 0.0055 E18.5 retina GGTCACATCT (4) 5.5 0.0055 E18.5 retina TTTTAAAAAT (4) 3.6 0.0036 E18.5 retina AGGAACTGTA (19) 1.8 0.0018 E18.5 retina CCTCTAATCC (8) 1.8 0.0018 E18.5 retina GCCGAAAACT (2) 1.8 0.0018 E18.5 retina GGCTCTGCCA (6) 1.8 0.0018 P0.5 retina GGTCACATCT (4) 7.9 0.0079 P0.5 retina TTGTGGTGAC (26) 7.9 0.0079 P0.5 retina ATGTTGCTGC (3) 3.9 0.0039 P0.5 retina CCTCTAATCC (8) 2 0.002 P2.5 retina TTGTGGTGAC (26) 14.1 0.0141 P2.5 retina ATGTTGCTGC (3) 10.6 0.0106 P2.5 retina GGTCACATCT (4) 5.3 0.0053 P2.5 retina AGGAACTGTA (19) 3.5 0.0035 P2.5 retina CCTCTAATCC (8) 3.5 0.0035 P2.5 retina GTGTAGGTGT (3) 1.8 0.0018 P2.5 retina TTTTAAAAAT (4) 1.8 0.0018 P4.5 retina TTGTGGTGAC (26) 19.8 0.0198 P4.5 retina ATGTTGCTGC (3) 7.9 0.0079 P4.5 retina GGTCACATCT (4) 7.9 0.0079 P4.5 retina TAGAAATAGG 2 0.002 P4.5 retina TTTTAAAAAT (4) 2 0.002 P6.5 retina ATGTTGCTGC (3) 15 0.015 P6.5 retina TTGTGGTGAC (26) 11.7 0.0117 P6.5 retina GGTCACATCT (4) 6.7 0.0067 P6.5 retina AACCTGGACA (5) 5 0.005 P6.5 retina AGGAACTGTA (19) 1.7 0.0017 P6.5 retina AGTCACCACA (3) 1.7 0.0017 P6.5 retina CCTCTAATCC (8) 1.7 0.0017 P6.5 retina TTTTAAAAAT (4) 1.7 0.0017 P10.5 crx- retina GGTCACATCT (4) 14.9 0.0149 P10.5 crx- retina TTGTGGTGAC (26) 9.3 0.0093 P10.5 crx- retina ATGTTGCTGC (3) 5.6 0.0056 P10.5 crx- retina AGTCACCACA (3) 1.9 0.0019 P10.5 crx- retina TTTTAAAAAT (4) 1.9 0.0019 P10.5 crx+ retina ATGTTGCTGC (3) 23.1 0.0231 P10.5 crx+ retina TTGTGGTGAC (26) 23.1 0.0231 P10.5 crx+ retina AGGAACTGTA (19) 3.8 0.0038 P10.5 crx+ retina GCCGAAAACT (2) 3.8 0.0038 P10.5 crx+ retina GGTCACATCT (4) 3.8 0.0038 P10.5 crx+ retina AGTCACCACA (3) 1.9 0.0019 P10.5 crx+ retina GTGTAGGTGT (3) 1.9 0.0019 P10.5 crx+ retina TTTTAAAAAT (4) 1.9 0.0019 Adult retinal GGTCACATCT (4) 9.3 0.0093 Adult retinal TTGTGGTGAC (26) 7.4 0.0074 Adult retinal CCTCTAATCC (8) 3.7 0.0037 Adult retinal AGTCACCACA (3) 1.9 0.0019 Adult retinal ATGTTGCTGC (3) 1.9 0.0019 Adult retinal GCCGAAAACT (2) 1.9 0.0019 Adult retinal GGCTCTGCCA (6) 1.9 0.0019 ONL AGGAACTGTA (19) 11.5 0.0115 ONL ATGTTGCTGC (3) 7.7 0.0077 ONL TTGTGGTGAC (26) 5.7 0.0057 ONL TTTTAAAAAT (4) 5.7 0.0057 ONL GGTCACATCT (4) 3.8 0.0038 ONL AACCTGGACA (5) 1.9 0.0019 ONL CCTCTAATCC (8) 1.9 0.0019