Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291880	Tmod2	tropomodulin 2	9	9 38.0 cM	50876
Gene Ontology	actin binding | actin filament organization | cytoskeleton | F-actin capping protein complex | learning and/or memory | nerve-nerve synaptic transmission | positive regulation of G-protein coupled receptor protein signaling pathway | tropomyosin binding
Human Homolog	TMOD2[tropomodulin 2 (neuronal)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACTGGTCA 6.5 0.0065 P8 Cb GC AGAAGTTAGT 3.3 0.0033 P8 Cb GC AGGAACTGTA (19) 1.6 0.0016 P8 Cb GC ATTAAAAATA (3) 1.6 0.0016 Cb medulloblastoma AGAAGTTAGT 4.6 0.0046 Cb medulloblastoma TGACAAAAAA (4) 4.6 0.0046 P8 GC+1d culture CCACTGGTCA 5.7 0.0057 P8 GC+1d culture CTGGTGGAAG (4) 2.3 0.0023 P8 GC+1d culture TGAAAGAAGT (4) 2.3 0.0023 P8 GC+1d culture ATTAAAAATA (3) 1.1 0.0011 P8 GC+1d culture ATTTTAACCA (2) 1.1 0.0011 P8 GC+1d culture CCCTGCTACT (2) 1.1 0.0011 P8 GC+SHH+1d culture AGAAGTTAGT 2.3 0.0023 P8 GC+SHH+1d culture ATTAAAAATA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGAAAGAAGT (4) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTAACCA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTGGAAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGACAAAAAA (4) 1.2 0.0012 3T3 fibroblasts CTGGTGGAAG (4) 3.5 0.0035 3T3 fibroblasts GGCAGAAAGA (7) 3.5 0.0035 E15 cortex AGAAGTTAGT 4.9 0.0049 E15 cortex TGAAAGAAGT (4) 4.9 0.0049 E15 cortex TGGGTTCAGT (2) 4.9 0.0049 P1 cortex ATTAAAAATA (3) 9.1 0.0091 P1 cortex AGGAACTGTA (19) 4.5 0.0045 P1 cortex CCACTGGTCA 4.5 0.0045 P1 cortex CTGGTGGAAG (4) 4.5 0.0045 Hypothalamus ATTAAAAATA (3) 5.4 0.0054 Hypothalamus CCACTGGTCA 3.6 0.0036 Hypothalamus CCCTGCTACT (2) 3.6 0.0036 Hypothalamus CTACCACACC 1.8 0.0018 Hypothalamus GGCAGAAAGA (7) 1.8 0.0018 Hypothalamus TGAAAGAAGT (4) 1.8 0.0018 E12.5 retina AGGAACTGTA (19) 1.9 0.0019 E12.5 retina ATTTTAACCA (2) 1.9 0.0019 E12.5 retina CTGGTGGAAG (4) 1.9 0.0019 E14.5 retina ATTTTAACCA (2) 3.6 0.0036 E14.5 retina AGGAACTGTA (19) 1.8 0.0018 E16.5 retina ATTTTAACCA (2) 5.4 0.0054 E18.5 retina AGGAACTGTA (19) 1.8 0.0018 E18.5 retina CTGGTGGAAG (4) 1.8 0.0018 P0.5 retina ATTTTAACCA (2) 2 0.002 P0.5 retina GGCAGAAAGA (7) 2 0.002 P0.5 retina TGAAAGAAGT (4) 2 0.002 P0.5 retina TGACAAAAAA (4) 2 0.002 P2.5 retina AGGAACTGTA (19) 3.5 0.0035 P2.5 retina ATTAAAAATA (3) 3.5 0.0035 P2.5 retina AGAAGTTAGT 1.8 0.0018 P2.5 retina CTACCACACC 1.8 0.0018 P2.5 retina TGAAAGAAGT (4) 1.8 0.0018 P4.5 retina ATTAAAAATA (3) 4 0.004 P4.5 retina ATTTTAACCA (2) 2 0.002 P4.5 retina CCACTGGTCA 2 0.002 P4.5 retina CTACCACACC 2 0.002 P6.5 retina AGAAGTTAGT 3.3 0.0033 P6.5 retina ATTAAAAATA (3) 3.3 0.0033 P6.5 retina AGGAACTGTA (19) 1.7 0.0017 P6.5 retina TGGGTTCAGT (2) 1.7 0.0017 P10.5 crx- retina ATTTTAACCA (2) 1.9 0.0019 P10.5 crx- retina CCACTGGTCA 1.9 0.0019 P10.5 crx+ retina AGGAACTGTA (19) 3.8 0.0038 P10.5 crx+ retina TGGGTTCAGT (2) 1.9 0.0019 Adult retinal CTACCACACC 3.7 0.0037 Adult retinal TGAAAGAAGT (4) 3.7 0.0037 Adult retinal AGAAGTTAGT 1.9 0.0019 Adult retinal ATTAAAAATA (3) 1.9 0.0019 Adult retinal CCCTGCTACT (2) 1.9 0.0019 ONL AGGAACTGTA (19) 11.5 0.0115 ONL GGCAGAAAGA (7) 1.9 0.0019