Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291917	Txn2	thioredoxin 2	15		56551
Gene Ontology	electron transport | electron transporter activity | mitochondrion
Human Homolog	TXN2[thioredoxin 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCAGCCTG (4) 27.7 0.0277 P8 Cb GC GGCCAAGTGG (3) 9.8 0.0098 P8 Cb GC CATCAGCCTC (2) 8.2 0.0082 P8 Cb GC ATGGTCTGCT (3) 1.6 0.0016 Cb medulloblastoma CCTCAGCCTG (4) 27.7 0.0277 Cb medulloblastoma GGCCAAGTGG (3) 18.5 0.0185 Cb medulloblastoma CATCAGCCTC (2) 11.6 0.0116 Cb medulloblastoma ATGGTCTGCT (3) 4.6 0.0046 Cb medulloblastoma GGGGCTGGGG (9) 4.6 0.0046 Cb medulloblastoma CACAGCTCTG (24) 2.3 0.0023 Cb medulloblastoma GGGGGTGGGG (13) 2.3 0.0023 Cb medulloblastoma TGGGCTCCAG (2) 2.3 0.0023 P8 GC+1d culture CCTCAGCCTG (4) 35.4 0.0354 P8 GC+1d culture GGCCAAGTGG (3) 12.6 0.0126 P8 GC+1d culture CATCAGCCTC (2) 6.8 0.0068 P8 GC+1d culture GGGGCTGGGG (9) 1.1 0.0011 P8 GC+1d culture GGGGGTGGGG (13) 1.1 0.0011 P8 GC+1d culture TGGGCTCCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTCAGCCTG (4) 31.6 0.0316 P8 GC+SHH+1d culture GGCCAAGTGG (3) 19.9 0.0199 P8 GC+SHH+1d culture CATCAGCCTC (2) 4.7 0.0047 P8 GC+SHH+1d culture GGGGCTGGGG (9) 3.5 0.0035 P8 GC+SHH+1d culture GCCAGGACCC (6) 2.3 0.0023 P8 GC+SHH+1d culture GGGGGTGGGG (13) 1.2 0.0012 P8 GC+SHH+1d culture TGGGCTCCAG (2) 1.2 0.0012 3T3 fibroblasts CCTCAGCCTG (4) 143.7 0.1437 3T3 fibroblasts GGCCAAGTGG (3) 35 0.035 3T3 fibroblasts CATCAGCCTC (2) 28 0.028 E15 cortex CCTCAGCCTG (4) 34.6 0.0346 E15 cortex CATCAGCCTC (2) 4.9 0.0049 E15 cortex GGCCAAGTGG (3) 4.9 0.0049 P1 cortex CACAGCTCTG (24) 18.2 0.0182 P1 cortex CCTCAGCCTG (4) 13.6 0.0136 P1 cortex GGCCAAGTGG (3) 13.6 0.0136 P1 cortex CATCAGCCTC (2) 4.5 0.0045 Hypothalamus GGCCAAGTGG (3) 45.3 0.0453 Hypothalamus CCTCAGCCTG (4) 10.9 0.0109 Hypothalamus GCCAAAGTGG (3) 1.8 0.0018 Hypothalamus GGGGCTGGGG (9) 1.8 0.0018 Hypothalamus GGGGGTGGGG (13) 1.8 0.0018 E12.5 retina CCTCAGCCTG (4) 18.8 0.0188 E12.5 retina GGCCAAGTGG (3) 18.8 0.0188 E12.5 retina GGGGGTGGGG (13) 1.9 0.0019 E14.5 retina GGCCAAGTGG (3) 18.2 0.0182 E14.5 retina GGGGCTGGGG (9) 7.3 0.0073 E14.5 retina CATCAGCCTC (2) 5.5 0.0055 E14.5 retina CCTCAGCCTG (4) 3.6 0.0036 E14.5 retina ATGGTCTGCT (3) 1.8 0.0018 E14.5 retina GCCAGGACCC (6) 1.8 0.0018 E14.5 retina GGGGGTGGGG (13) 1.8 0.0018 E16.5 retina GGCCAAGTGG (3) 23.5 0.0235 E16.5 retina CCTCAGCCTG (4) 9.1 0.0091 E16.5 retina CATCAGCCTC (2) 7.2 0.0072 E16.5 retina GCCAGGACCC (6) 1.8 0.0018 E16.5 retina GGGGCTGGGG (9) 1.8 0.0018 E18.5 retina GGCCAAGTGG (3) 29.1 0.0291 E18.5 retina CCTCAGCCTG (4) 14.6 0.0146 E18.5 retina CATCAGCCTC (2) 5.5 0.0055 E18.5 retina GGGGCTGGGG (9) 3.6 0.0036 E18.5 retina GCCAAAGTGG (3) 1.8 0.0018 P0.5 retina GGCCAAGTGG (3) 11.8 0.0118 P0.5 retina CCTCAGCCTG (4) 5.9 0.0059 P0.5 retina GCCAAAGTGG (3) 3.9 0.0039 P0.5 retina AAGGAATAAA 2 0.002 P0.5 retina CATCAGCCTC (2) 2 0.002 P2.5 retina GGCCAAGTGG (3) 28.2 0.0282 P2.5 retina CCTCAGCCTG (4) 14.1 0.0141 P2.5 retina CATCAGCCTC (2) 5.3 0.0053 P2.5 retina GCCAAAGTGG (3) 1.8 0.0018 P4.5 retina GGCCAAGTGG (3) 17.8 0.0178 P4.5 retina CCTCAGCCTG (4) 11.9 0.0119 P4.5 retina CATCAGCCTC (2) 5.9 0.0059 P4.5 retina GCCAGGACCC (6) 2 0.002 P4.5 retina GGGGGTGGGG (13) 2 0.002 P6.5 retina CCTCAGCCTG (4) 26.7 0.0267 P6.5 retina GGCCAAGTGG (3) 15 0.015 P6.5 retina CATCAGCCTC (2) 3.3 0.0033 P6.5 retina GGGGCTGGGG (9) 3.3 0.0033 P6.5 retina AAGGAATAAA 1.7 0.0017 P6.5 retina GCCAGGACCC (6) 1.7 0.0017 P10.5 crx- retina CCTCAGCCTG (4) 39 0.039 P10.5 crx- retina GGCCAAGTGG (3) 29.7 0.0297 P10.5 crx- retina CATCAGCCTC (2) 22.3 0.0223 P10.5 crx- retina GCCAAAGTGG (3) 5.6 0.0056 P10.5 crx- retina GGGGCTGGGG (9) 3.7 0.0037 P10.5 crx+ retina CCTCAGCCTG (4) 26.9 0.0269 P10.5 crx+ retina GGCCAAGTGG (3) 26.9 0.0269 P10.5 crx+ retina CATCAGCCTC (2) 5.8 0.0058 P10.5 crx+ retina GGGGCTGGGG (9) 5.8 0.0058 P10.5 crx+ retina GGGGGTGGGG (13) 3.8 0.0038 P10.5 crx+ retina TGGGCTCCAG (2) 1.9 0.0019 Adult retinal CCTCAGCCTG (4) 20.4 0.0204 Adult retinal GGCCAAGTGG (3) 11.1 0.0111 Adult retinal GGGGCTGGGG (9) 9.3 0.0093 Adult retinal CATCAGCCTC (2) 7.4 0.0074 Adult retinal CACAGCTCTG (24) 1.9 0.0019 ONL CCTCAGCCTG (4) 11.5 0.0115 ONL CATCAGCCTC (2) 3.8 0.0038 ONL GGCCAAGTGG (3) 3.8 0.0038 ONL GCCAAAGTGG (3) 1.9 0.0019